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Aliases for GC07P043096 Gene

Subcategory (RNA class) for GC07P043096 Gene

Y RNA

Quality Score for this RNA gene is

2

Aliases for GC07P043096 Gene

No Aliases found

ORGUL Members for GC07P043096 Gene

No data available for External Ids for GC07P043096 Gene

Summaries for GC07P043096 Gene

GeneCards Summary for GC07P043096 Gene

GC07P043096 is an RNA Gene, and is affiliated with the Y RNA class.

Additional gene information for GC07P043096 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC07P043096 Gene

Genomics for GC07P043096 Gene

Regulatory Elements for GC07P043096 Gene

Enhancers for GC07P043096 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07H043078 1.1 FANTOM5 ENCODE 0.4 -18.8 -18798 1 MAFG DPF2 ZBTB40 GABPA FOSL1 ZNF316 MAFF POLR2A ATF7 ZBTB33 HECW1 HECW1-IT1 ENSG00000228680 LOC105375254 GC07P043096 LOC105375253
GH07H043071 0.7 ENCODE 0.3 -24.3 -24273 1 CTCF REST RAD21 CHAMP1 ZNF592 CC2D1A MTA3 SMARCA4 IKZF1 ZNF24 LOC105375254 HECW1 HECW1-IT1 GC07P043096 LOC105375253
GH07H043073 0.4 ENCODE 0.3 -23.3 -23292 0 IKZF1 HECW1 HECW1-IT1 LOC105375254 GC07P043096 LOC105375253
GH07H043039 0.5 ENCODE 0.2 -57.2 -57215 0 IKZF1 FOXP2 EBF1 GC07P043096 LOC105375253
GH07H043037 0.5 ENCODE 0.2 -58.6 -58572 1 JUND TRIM24 MGA ZNF592 LOC105375254 GC07P043096 LOC105375253
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC07P043096 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC07P043096 Gene

Chromosome:
7
Start:
43,096,731 bp from pter
End:
43,096,842 bp from pter
Size:
112 bases
Orientation:
Plus strand

Genomic View for GC07P043096 Gene

Genes around GC07P043096 on UCSC Golden Path with GeneCards custom track

GC07P043096 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC07P043096 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC07P043096 Gene

ORGUL Member Location for GC07P043096 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC07P043096 Gene

Proteins for GC07P043096 Gene

Post-translational modifications for GC07P043096 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC07P043096 Gene

Domains & Families for GC07P043096 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC07P043096 Gene

Function for GC07P043096 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC07P043096 Gene

Localization for GC07P043096 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC07P043096 Gene

Pathways & Interactions for GC07P043096 Gene

SuperPathways for GC07P043096 Gene

No Data Available

Interacting Proteins for GC07P043096 Gene

Gene Ontology (GO) - Biological Process for GC07P043096 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC07P043096 Gene

Drugs & Compounds for GC07P043096 Gene

No Compound Related Data Available

Transcripts for GC07P043096 Gene

fRNAdb Secondary structures for GC07P043096 Gene

  • FR067774
  • FR262599

Alternative Splicing Database (ASD) splice patterns (SP) for GC07P043096 Gene

No ASD Table

Relevant External Links for GC07P043096 Gene

GeneLoc Exon Structure for
GC07P043096

No data available for mRNA/cDNA for GC07P043096 Gene

Expression for GC07P043096 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC07P043096 Gene

Orthologs for GC07P043096 Gene

No data available for Orthologs and Evolution for GC07P043096 Gene

Paralogs for GC07P043096 Gene

No data available for Paralogs for GC07P043096 Gene

Variants for GC07P043096 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC07P043096 Gene

Disorders for GC07P043096 Gene

No disorders were found for GC07P043096 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC07P043096 Gene

Publications for GC07P043096 Gene

  1. NONCODE: an integrated knowledge database of non-coding RNAs. (PMID: 15608158) Liu C … Chen R (Nucleic acids research 2005) 1
  2. Conserved features of Y RNAs: a comparison of experimentally derived secondary structures. (PMID: 10606662) Teunissen SW … Pruijn GJ (Nucleic acids research 2000) 1
  3. Ro ribonucleoproteins contribute to the resistance of Deinococcus radiodurans to ultraviolet irradiation. (PMID: 10766734) Chen X … Wolin SL (Genes & development 2000) 1
  4. Caenorhabditis elegans embryos contain only one major species of Ro RNP. (PMID: 7489501) Van Horn DJ … Wolin SL (RNA (New York, N.Y.) 1995) 1

Products for GC07P043096 Gene

Sources for GC07P043096 Gene

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