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Aliases for GC07P039888 Gene

Subcategory (RNA class) for GC07P039888 Gene

SRP

Quality Score for this RNA gene is

1

Aliases for GC07P039888 Gene

No Aliases found

ORGUL Members for GC07P039888 Gene

No data available for External Ids for GC07P039888 Gene

Summaries for GC07P039888 Gene

GeneCards Summary for GC07P039888 Gene

GC07P039888 is an RNA Gene, and is affiliated with the SRP RNA class.

Additional gene information for GC07P039888 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC07P039888 Gene

Genomics for GC07P039888 Gene

Regulatory Elements for GC07P039888 Gene

Enhancers for GC07P039888 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07H039892 0.5 ENCODE 0.7 +4.6 4576 0 GATA3 FOS FOXA1 CDK13 RN7SL496P GC07P039888 ENSG00000259826
GH07H039894 0.5 ENCODE 0.7 +4.2 4182 0 GATA3 FOS FOXA1 RN7SL496P GC07P039888 ENSG00000259826
GH07H039887 0.5 ENCODE 0.7 +0.2 180 1 CTBP1 GATA3 IKZF1 DPF2 YAE1D1 LOC105375240 RN7SL496P GC07P039888 ENSG00000259826
GH07H039891 0.5 ENCODE 0.7 +3.2 3167 0 HDAC1 HDAC2 CEBPB KDM1A RN7SL496P GC07P039888 ENSG00000259826
GH07H039896 0.8 Ensembl 0.4 +8.3 8326 0 CTCF FOXA2 ZNF2 RAD21 RFX5 YY1 CC2D1A ZNF316 SMC3 ZNF143 GC07P039888 RN7SL496P ENSG00000259826
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC07P039888 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC07P039888 Gene

Chromosome:
7
Start:
39,888,375 bp from pter
End:
39,888,664 bp from pter
Size:
290 bases
Orientation:
Plus strand

Genomic View for GC07P039888 Gene

Genes around GC07P039888 on UCSC Golden Path with GeneCards custom track

GC07P039888 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC07P039888 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC07P039888 Gene

Proteins for GC07P039888 Gene

Post-translational modifications for GC07P039888 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC07P039888 Gene

Domains & Families for GC07P039888 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC07P039888 Gene

Function for GC07P039888 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC07P039888 Gene

Localization for GC07P039888 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC07P039888 Gene

Pathways & Interactions for GC07P039888 Gene

SuperPathways for GC07P039888 Gene

No Data Available

Interacting Proteins for GC07P039888 Gene

Gene Ontology (GO) - Biological Process for GC07P039888 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC07P039888 Gene

Drugs & Compounds for GC07P039888 Gene

No Compound Related Data Available

Transcripts for GC07P039888 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC07P039888 Gene

No ASD Table

Relevant External Links for GC07P039888 Gene

GeneLoc Exon Structure for
GC07P039888

No data available for mRNA/cDNA for GC07P039888 Gene

Expression for GC07P039888 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC07P039888 Gene

Orthologs for GC07P039888 Gene

No data available for Orthologs and Evolution for GC07P039888 Gene

Paralogs for GC07P039888 Gene

No data available for Paralogs for GC07P039888 Gene

Variants for GC07P039888 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC07P039888 Gene

Disorders for GC07P039888 Gene

No disorders were found for GC07P039888 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC07P039888 Gene

Publications for GC07P039888 Gene

  1. NONCODE: an integrated knowledge database of non-coding RNAs. (PMID: 15608158) Liu C … Chen R (Nucleic acids research 2005) 1
  2. Structure, function and evolution of the signal recognition particle. (PMID: 12853463) Nagai K … Jovine L (The EMBO journal 2003) 1
  3. Structure of the phylogenetically most conserved domain of SRP RNA. (PMID: 10580470) Schmitz U … James TL (RNA (New York, N.Y.) 1999) 1
  4. The signal recognition particle (SRP) database. (PMID: 1317959) Zwieb C … Larsen N (Nucleic acids research 1992) 1

Products for GC07P039888 Gene

Sources for GC07P039888 Gene

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