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Aliases for GC07P037419 Gene

Subcategory (RNA class) for GC07P037419 Gene

snoRNA

Quality Score for this RNA gene is

2

Aliases for GC07P037419 Gene

No Aliases found

ORGUL Members for GC07P037419 Gene

No data available for External Ids for GC07P037419 Gene

Summaries for GC07P037419 Gene

GeneCards Summary for GC07P037419 Gene

GC07P037419 is an RNA Gene, and is affiliated with the snoRNA class.

fRNAdb sequence ontologies for GC07P037419 Gene

  • H_ACA_box_snoRNA: Members of the box H/ACA family contain an ACA triplet, exactly 3 nt upstream from the 3' end and an H-box in a hinge region that links two structurally similar functional domains of the molecule. Both boxes are important for snoRNA biosynthesis and function. A few box H/ACA snoRNAs are involved in rRNA processing; most others are known or predicted to participate in selection of uridine nucleosides in rRNA to be converted to pseudouridines. Site selection is mediated by direct base pairing of the snoRNA with rRNA through one or both targeting domains.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC07P037419 Gene

Genomics for GC07P037419 Gene

Regulatory Elements for GC07P037419 Gene

Enhancers for GC07P037419 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07G037408 1.5 Ensembl ENCODE dbSUPER 0.4 -9.8 -9789 3.5 HDGF SIN3A FEZF1 ZNF48 ZNF2 YY1 GLIS2 FOS ZNF263 REST ELMO1 RNU6-565P EPDR1 GPR141 GC07P037419 RPS10P14
GH07G037405 1.2 ENCODE dbSUPER 0.4 -13.6 -13635 0.2 HDAC1 RAD21 YY1 TCF12 ZNF766 GATA2 ZBTB11 USF2 NR2F2 ZNF589 ENSG00000201566 ELMO1 RNU6-565P GC07P037419 RPS10P14
GH07G037417 0.6 Ensembl dbSUPER 0.7 -2.5 -2527 0.2 HNF4A ELMO1 GC07P037419 RPS10P14
GH07G037390 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -27.9 -27915 3.4 MAX RAD21 ZIC2 YY1 GATA2 ZNF366 GLIS1 HNF4A MYC ELMO1 ENSG00000200113 ENSG00000201566 RNU6-565P GPR141 RPS10P14 GC07P037419
GH07G037406 0.8 Ensembl dbSUPER 0.4 -13.1 -13127 0.2 ZNF197 ZKSCAN8 FOXJ2 PRDM1 YY1 NR2C2 ELMO1 RNU6-565P EPDR1 GPR141 GC07P037419 RPS10P14
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC07P037419 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC07P037419 Gene

Chromosome:
7
Start:
37,419,627 bp from pter
End:
37,419,767 bp from pter
Size:
141 bases
Orientation:
Plus strand

Genomic View for GC07P037419 Gene

Genes around GC07P037419 on UCSC Golden Path with GeneCards custom track

GC07P037419 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC07P037419 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC07P037419 Gene

Proteins for GC07P037419 Gene

Post-translational modifications for GC07P037419 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC07P037419 Gene

Domains & Families for GC07P037419 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC07P037419 Gene

Function for GC07P037419 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC07P037419 Gene

Localization for GC07P037419 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC07P037419 Gene

Pathways & Interactions for GC07P037419 Gene

SuperPathways for GC07P037419 Gene

No Data Available

Interacting Proteins for GC07P037419 Gene

Gene Ontology (GO) - Biological Process for GC07P037419 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC07P037419 Gene

Drugs & Compounds for GC07P037419 Gene

No Compound Related Data Available

Transcripts for GC07P037419 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC07P037419 Gene

No ASD Table

Relevant External Links for GC07P037419 Gene

GeneLoc Exon Structure for
GC07P037419

No data available for mRNA/cDNA for GC07P037419 Gene

Expression for GC07P037419 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC07P037419 Gene

Orthologs for GC07P037419 Gene

No data available for Orthologs and Evolution for GC07P037419 Gene

Paralogs for GC07P037419 Gene

No data available for Paralogs for GC07P037419 Gene

Variants for GC07P037419 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC07P037419 Gene

Disorders for GC07P037419 Gene

No disorders were found for GC07P037419 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC07P037419 Gene

Publications for GC07P037419 Gene

  1. Human box H/ACA pseudouridylation guide RNA machinery. (PMID: 15199136) Kiss A.M. … Kiss T. (Mol. Cell. Biol. 2004) 1

Products for GC07P037419 Gene

Sources for GC07P037419 Gene

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