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Aliases for GC07P020793 Gene

Subcategory (RNA class) for GC07P020793 Gene

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Quality Score for this RNA gene is

0.4

Aliases for GC07P020793 Gene

No Aliases found

ORGUL Members for GC07P020793 Gene

No data available for External Ids for GC07P020793 Gene

Summaries for GC07P020793 Gene

GeneCards Summary for GC07P020793 Gene

GC07P020793 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC07P020793 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC07P020793

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC07P020793 Gene

Genomics for GC07P020793 Gene

Regulatory Elements for GC07P020793 Gene

Enhancers for GC07P020793 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07G020793 1.9 VISTA 0.7 +0.1 68 1.3 RING1 RNF2 SUZ12 CBX2 BMI1 RBBP5 CBX8 SMARCA4 POLR2A ZSCAN29 GC07P020793 GC07M020819
GH07G020789 1.6 VISTA 0.7 -3.3 -3300 1.0 ZNF362 CBX8 RNF2 SUZ12 HLF CBX2 EZH2 GC07P020793 SP8
GH07G020797 2.3 VISTA FANTOM5 Ensembl ENCODE dbSUPER 0.4 +5.4 5351 3.7 ATF1 PKNOX1 ZNF121 GLIS2 KLF7 ZNF263 SP3 TBX21 MBD2 CBX8 SP8 GC07P020793 GC07M020819
GH07G020795 0.7 ENCODE 0.7 +2.5 2478 0.2 PKNOX1 SMAD5 CBX2 ELF1 TFDP1 POLR2H SP1 NFIC HDAC2 POLR2A GC07P020793 GC07M020819
GH07G020790 0.7 ENCODE 0.7 -2.3 -2317 0.8 ZNF777 ZNF362 L3MBTL2 RNF2 SUZ12 CBX2 BMI1 ZNF384 RBBP5 CBX8 GC07P020793 SP8
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC07P020793 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC07P020793 Gene

Chromosome:
7
Start:
20,793,579 bp from pter
End:
20,793,712 bp from pter
Size:
134 bases
Orientation:
Plus strand

Genomic View for GC07P020793 Gene

Genes around GC07P020793 on UCSC Golden Path with GeneCards custom track

GC07P020793 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC07P020793 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC07P020793 Gene

ORGUL Member Location for GC07P020793 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC07P020793 Gene

Proteins for GC07P020793 Gene

Post-translational modifications for GC07P020793 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC07P020793 Gene

Domains & Families for GC07P020793 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC07P020793 Gene

Function for GC07P020793 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC07P020793 Gene

Localization for GC07P020793 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC07P020793 Gene

Pathways & Interactions for GC07P020793 Gene

SuperPathways for GC07P020793 Gene

No Data Available

Interacting Proteins for GC07P020793 Gene

Gene Ontology (GO) - Biological Process for GC07P020793 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC07P020793 Gene

Drugs & Compounds for GC07P020793 Gene

No Compound Related Data Available

Transcripts for GC07P020793 Gene

fRNAdb Secondary structures for GC07P020793 Gene

  • FR118957
  • FR009619

Alternative Splicing Database (ASD) splice patterns (SP) for GC07P020793 Gene

No ASD Table

Relevant External Links for GC07P020793 Gene

GeneLoc Exon Structure for
GC07P020793

No data available for mRNA/cDNA for GC07P020793 Gene

Expression for GC07P020793 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC07P020793 Gene

Orthologs for GC07P020793 Gene

No data available for Orthologs and Evolution for GC07P020793 Gene

Paralogs for GC07P020793 Gene

No data available for Paralogs for GC07P020793 Gene

Variants for GC07P020793 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC07P020793 Gene

Disorders for GC07P020793 Gene

No disorders were found for GC07P020793 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC07P020793 Gene

Publications for GC07P020793 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen J.S. … Haussler D. (PLoS Comput. Biol. 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S. … Stadler P.F. (Nat. Biotechnol. 2005) 1

Products for GC07P020793 Gene

Sources for GC07P020793 Gene

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