Free for academic non-profit institutions. Other users need a Commercial license

Aliases for GC07P002305 Gene

Subcategory (RNA class) for GC07P002305 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for GC07P002305 Gene

No Aliases found

No data available for External Ids for GC07P002305 Gene

Summaries for GC07P002305 Gene

GeneCards Summary for GC07P002305 Gene

GC07P002305 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for GC07P002305 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for GC07P002305

Additional gene information for GC07P002305 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC07P002305 Gene

Genomics for GC07P002305 Gene

Regulatory Elements for GC07P002305 Gene

Enhancers for GC07P002305 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07H002304 1.2 Ensembl ENCODE 0.7 -0.6 -648 0 HDAC1 TBP ATF1 TBL1XR1 ARNT NFXL1 TCF12 GATA2 ATF7 CREM MRM2 NUDT1 MAD1L1 GC07P002305 IMMP1LP3
GH07H002306 1.1 Ensembl ENCODE 0.7 +2.1 2120 2 HDAC1 HDGF PKNOX1 BMI1 RELA ZFHX2 POLR2A EED ZNF143 ATF7 SNX8 MRM2 NUDT1 MAD1L1 GC07P002305 GC07M002345
GH07H002298 1.5 FANTOM5 Ensembl ENCODE 0.4 -5.4 -5358 3 HDGF PKNOX1 TBL1XR1 SIN3A NFXL1 BMI1 BATF TCF12 EGR1 ATF7 MRM2 SNX8 NUDT1 MAD1L1 LFNG GC07P002305 IMMP1LP3
GH07H002309 1.4 FANTOM5 ENCODE 0.4 +6.7 6703 5 HDGF PKNOX1 MLX ARNT ARID4B SIN3A YBX1 DMAP1 ZNF2 ZBTB7B SNX8 NUDT1 MRM2 MAD1L1 CHST12 BRAT1 GC07P002305 GC07M002345
GH07H002325 0.9 FANTOM5 Ensembl 0.4 +19.8 19802 0 HDAC1 SMARCE1 CTBP1 SMARCA4 IKZF1 SNX8 EIF3B NUDT1 MRM2 MAD1L1 LOC645357 CHST12 LFNG GC07P002305 GC07M002345
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC07P002305 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC07P002305 Gene

Chromosome:
7
Start:
2,305,576 bp from pter
End:
2,305,612 bp from pter
Size:
37 bases
Orientation:
Plus strand

Genomic View for GC07P002305 Gene

Genes around GC07P002305 on UCSC Golden Path with GeneCards custom track

GC07P002305 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC07P002305 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC07P002305 Gene

ORGUL Member Location for GC07P002305 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC07P002305 Gene

Proteins for GC07P002305 Gene

Post-translational modifications for GC07P002305 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC07P002305 Gene

Domains & Families for GC07P002305 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC07P002305 Gene

Function for GC07P002305 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC07P002305 Gene

Localization for GC07P002305 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC07P002305 Gene

Pathways & Interactions for GC07P002305 Gene

SuperPathways for GC07P002305 Gene

No Data Available

Interacting Proteins for GC07P002305 Gene

Gene Ontology (GO) - Biological Process for GC07P002305 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC07P002305 Gene

Drugs & Compounds for GC07P002305 Gene

No Compound Related Data Available

Transcripts for GC07P002305 Gene

fRNAdb Secondary structures for GC07P002305 Gene

  • FR052969
  • FR050780
  • FR398335

Alternative Splicing Database (ASD) splice patterns (SP) for GC07P002305 Gene

No ASD Table

Relevant External Links for GC07P002305 Gene

GeneLoc Exon Structure for
GC07P002305

No data available for mRNA/cDNA for GC07P002305 Gene

Expression for GC07P002305 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC07P002305 Gene

Orthologs for GC07P002305 Gene

No data available for Orthologs and Evolution for GC07P002305 Gene

Paralogs for GC07P002305 Gene

No data available for Paralogs for GC07P002305 Gene

Variants for GC07P002305 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC07P002305 Gene

Disorders for GC07P002305 Gene

No disorders were found for GC07P002305 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC07P002305 Gene

Publications for GC07P002305 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for GC07P002305 Gene

Sources for GC07P002305 Gene

Content
Loading form....