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Aliases for GC07P001203 Gene

Subcategory (RNA class) for GC07P001203 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for GC07P001203 Gene

No Aliases found

ORGUL Members for GC07P001203 Gene

No data available for External Ids for GC07P001203 Gene

Summaries for GC07P001203 Gene

GeneCards Summary for GC07P001203 Gene

GC07P001203 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for GC07P001203 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for GC07P001203

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC07P001203 Gene

Genomics for GC07P001203 Gene

Regulatory Elements for GC07P001203 Gene

Enhancers for GC07P001203 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07G001225 2.3 VISTA ENCODE 0.3 +22.4 22364 1.2 RING1 CTCF RB1 SUZ12 ZNF48 RAD21 ZKSCAN1 POLR2A SMC3 EZH2 UNCX GC07P001203
GH07G001228 1.8 VISTA 0.3 +25.1 25128 1.3 PKNOX1 SUZ12 BMI1 ZIC2 ETS1 ZFHX2 GATA3 CTBP1 ZNF366 PATZ1 UNCX GC07P001203
GH07G001169 1.5 Ensembl ENCODE dbSUPER 0.3 -33.8 -33773 1.3 PKNOX1 ATF1 ARID4B SIN3A DMAP1 ZNF48 YY1 SLC30A9 ZNF143 KLF13 LOC101927021 LOC105375120 C7orf50 TFAMP1 GC07P001163 GC07P001203
GH07G001197 1 ENCODE dbSUPER 0.4 -5.3 -5265 1.2 TBP SUZ12 JUN ZNF366 POLR2A RCOR1 FOS PRDM10 EZH2 RNF2 GC07P001203 GC07P001163
GH07G001191 1 Ensembl ENCODE 0.4 -11.3 -11256 1.0 CTCF PKNOX1 ATF1 ZBTB21 SUZ12 JUN CEBPG ZIC2 ZFHX2 SCRT2 ZFAND2A LOC105375120 GPER1 GC07P001203 GC07P001163
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC07P001203 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC07P001203 Gene

Chromosome:
7
Start:
1,203,737 bp from pter
End:
1,203,772 bp from pter
Size:
36 bases
Orientation:
Plus strand

Genomic View for GC07P001203 Gene

Genes around GC07P001203 on UCSC Golden Path with GeneCards custom track

GC07P001203 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC07P001203 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC07P001203 Gene

ORGUL Member Location for GC07P001203 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC07P001203 Gene

Proteins for GC07P001203 Gene

Post-translational modifications for GC07P001203 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC07P001203 Gene

Domains & Families for GC07P001203 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC07P001203 Gene

Function for GC07P001203 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC07P001203 Gene

Localization for GC07P001203 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC07P001203 Gene

Pathways & Interactions for GC07P001203 Gene

SuperPathways for GC07P001203 Gene

No Data Available

Interacting Proteins for GC07P001203 Gene

Gene Ontology (GO) - Biological Process for GC07P001203 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC07P001203 Gene

Drugs & Compounds for GC07P001203 Gene

No Compound Related Data Available

Transcripts for GC07P001203 Gene

fRNAdb Secondary structures for GC07P001203 Gene

  • FR257287
  • FR003380

Alternative Splicing Database (ASD) splice patterns (SP) for GC07P001203 Gene

No ASD Table

Relevant External Links for GC07P001203 Gene

GeneLoc Exon Structure for
GC07P001203

No data available for mRNA/cDNA for GC07P001203 Gene

Expression for GC07P001203 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC07P001203 Gene

Orthologs for GC07P001203 Gene

No data available for Orthologs and Evolution for GC07P001203 Gene

Paralogs for GC07P001203 Gene

No data available for Paralogs for GC07P001203 Gene

Variants for GC07P001203 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC07P001203 Gene

Disorders for GC07P001203 Gene

No disorders were found for GC07P001203 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC07P001203 Gene

Publications for GC07P001203 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A. … Carmell M.A. (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1

Products for GC07P001203 Gene

Sources for GC07P001203 Gene

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