Free for academic non-profit institutions. Other users need a Commercial license

GC07M146416 Gene(RNA Gene)

 

GCID:
GC07M146416
GIFtS:
3
Genes Participants
UDN Logo

Aliases for GC07M146416 Gene

Subcategory (RNA class) for GC07M146416 Gene

SRP

Quality Score for this RNA gene is

1

Aliases for GC07M146416 Gene

No Aliases found

ORGUL Members for GC07M146416 Gene

No data available for External Ids for GC07M146416 Gene

Summaries for GC07M146416 Gene

GeneCards Summary for GC07M146416 Gene

GC07M146416 is an RNA Gene, and is affiliated with the SRP RNA class.

Additional gene information for GC07M146416 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC07M146416 Gene

Genomics for GC07M146416 Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for GC07M146416 Gene

Promoters and enhancers for GC07M146416 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH07I146414 Enhancer 0.2 ENCODE 550.8 +1.8 1849 1.2 GC07M146416 GC07M146417 GC07M146323 CNTNAP2
GH07I146357 Enhancer 0.3 FANTOM5 0.2 +59.1 59055 0.5 CNTNAP2 GC07M146323 GC07M146416 GC07M146417
GH07I146344 Enhancer 0.2 ENCODE 0.2 +71.6 71569 0.2 GC07M146323 GC07M146416 GC07M146417 CNTNAP2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC07M146416 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC07M146416 Gene

Genomic Locations for GC07M146416 Gene
chr7:146,416,342-146,416,553
(GRCh38/hg38)
Size:
212 bases
Orientation:
Minus strand

Genomic View for GC07M146416 Gene

Genes around GC07M146416 on UCSC Golden Path with GeneCards custom track

GC07M146416 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC07M146416 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC07M146416 Gene

Proteins for GC07M146416 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for GC07M146416 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC07M146416 Gene

Domains & Families for GC07M146416 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC07M146416 Gene

Function for GC07M146416 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC07M146416 Gene

Localization for GC07M146416 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC07M146416 Gene

Pathways & Interactions for GC07M146416 Gene

SuperPathways for GC07M146416 Gene

PathCards logo More details on SuperPathways for GC07M146416
No Data Available

Interacting Proteins for GC07M146416 Gene

Gene Ontology (GO) - Biological Process for GC07M146416 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC07M146416 Gene

Drugs & Compounds for GC07M146416 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for GC07M146416 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Alternative Splicing Database (ASD) splice patterns (SP) for GC07M146416 Gene

No ASD Table

Relevant External Links for GC07M146416 Gene

GeneLoc Exon Structure for
GC07M146416

No data available for mRNA/cDNA for GC07M146416 Gene

Expression for GC07M146416 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC07M146416 Gene

Orthologs for GC07M146416 Gene

No data available for Orthologs and Evolution for GC07M146416 Gene

Paralogs for GC07M146416 Gene

No data available for Paralogs for GC07M146416 Gene

Variants for GC07M146416 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC07M146416 Gene

Disorders for GC07M146416 Gene

No disorders were found for GC07M146416 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC07M146416 Gene

Publications for GC07M146416 Gene

  1. NONCODE: an integrated knowledge database of non-coding RNAs. (PMID: 15608158) Liu C … Chen R (Nucleic acids research 2005) 1
  2. Structure, function and evolution of the signal recognition particle. (PMID: 12853463) Nagai K … Jovine L (The EMBO journal 2003) 1
  3. Structure of the phylogenetically most conserved domain of SRP RNA. (PMID: 10580470) Schmitz U … James TL (RNA (New York, N.Y.) 1999) 1
  4. The signal recognition particle (SRP) database. (PMID: 1317959) Zwieb C … Larsen N (Nucleic acids research 1992) 1

Products for GC07M146416 Gene

Sources for GC07M146416 Gene

Content
Loading form....