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Aliases for GC07M140095 Gene

Subcategory (RNA class) for GC07M140095 Gene

Y RNA

Quality Score for this RNA gene is

2

Aliases for GC07M140095 Gene

No Aliases found

ORGUL Members for GC07M140095 Gene

No data available for External Ids for GC07M140095 Gene

Summaries for GC07M140095 Gene

GeneCards Summary for GC07M140095 Gene

GC07M140095 is an RNA Gene, and is affiliated with the Y RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC07M140095 Gene

Genomics for GC07M140095 Gene

Regulatory Elements for GC07M140095 Gene

Enhancers for GC07M140095 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07G140084 1.1 Ensembl ENCODE 0.4 +9.7 9684 0.4 HDGF PKNOX1 CBX3 TBL1XR1 ZNF335 ZNF143 ETV6 RELB IKZF2 CREM KDM7A RNU1-58P GC07M140095 ENSG00000251728 LOC105375533
GH07G140079 0.8 ENCODE 0.4 +15.6 15597 0.1 CTCF ESRRA CBX3 SUZ12 ETV1 ZNF48 RAD21 RARA FOSL1 ZNF335 KDM7A LOC105375533 GC07M140095 ENSG00000251728
GH07G140165 1.6 FANTOM5 Ensembl ENCODE 0.2 -70.7 -70739 1.0 PKNOX1 FEZF1 ZNF2 FOS ZNF263 ZNF488 ZNF518A ATF4 SMARCA4 STAT3 RNU6-797P JHDM1D-AS1 KDM7A TBXAS1 GC07P140176 ENSG00000251728 GC07M140095
GH07G140174 1.2 ENCODE 0.2 -81.7 -81696 3.4 CREB3L1 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 TBX21 ZFP41 BRAF PARP12 KDM7A GC07P140176 ENSG00000251728 GC07M140095
GH07G140170 0.7 Ensembl 0.2 -76.0 -76009 0.8 SMAD5 MTA2 BHLHE40 CEBPG TBX21 FOXA1 FOSL1 NFIC POLR2A ZBTB48 KDM7A JHDM1D-AS1 GC07P140176 ENSG00000251728 GC07M140095
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC07M140095 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC07M140095 Gene

Chromosome:
7
Start:
140,094,696 bp from pter
End:
140,094,792 bp from pter
Size:
97 bases
Orientation:
Minus strand

Genomic View for GC07M140095 Gene

Genes around GC07M140095 on UCSC Golden Path with GeneCards custom track

GC07M140095 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC07M140095 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC07M140095 Gene

ORGUL Member Location for GC07M140095 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC07M140095 Gene

Proteins for GC07M140095 Gene

Post-translational modifications for GC07M140095 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC07M140095 Gene

Domains & Families for GC07M140095 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC07M140095 Gene

Function for GC07M140095 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC07M140095 Gene

Localization for GC07M140095 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC07M140095 Gene

Pathways & Interactions for GC07M140095 Gene

SuperPathways for GC07M140095 Gene

No Data Available

Interacting Proteins for GC07M140095 Gene

Gene Ontology (GO) - Biological Process for GC07M140095 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC07M140095 Gene

Drugs & Compounds for GC07M140095 Gene

No Compound Related Data Available

Transcripts for GC07M140095 Gene

fRNAdb Secondary structures for GC07M140095 Gene

  • FR179259
  • FR257729

Alternative Splicing Database (ASD) splice patterns (SP) for GC07M140095 Gene

No ASD Table

Relevant External Links for GC07M140095 Gene

GeneLoc Exon Structure for
GC07M140095

No data available for mRNA/cDNA for GC07M140095 Gene

Expression for GC07M140095 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC07M140095 Gene

Orthologs for GC07M140095 Gene

No data available for Orthologs and Evolution for GC07M140095 Gene

Paralogs for GC07M140095 Gene

No data available for Paralogs for GC07M140095 Gene

Variants for GC07M140095 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC07M140095 Gene

Disorders for GC07M140095 Gene

No disorders were found for GC07M140095 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC07M140095 Gene

Publications for GC07M140095 Gene

  1. NONCODE: an integrated knowledge database of non-coding RNAs. (PMID: 15608158) Liu C. … Chen R. (Nucleic Acids Res. 2005) 1
  2. Conserved features of Y RNAs: a comparison of experimentally derived secondary structures. (PMID: 10606662) Teunissen S.W. … Pruijn G.J. (Nucleic Acids Res. 2000) 1
  3. Ro ribonucleoproteins contribute to the resistance of Deinococcus radiodurans to ultraviolet irradiation. (PMID: 10766734) Chen X. … Wolin S.L. (Genes Dev. 2000) 1
  4. Caenorhabditis elegans embryos contain only one major species of Ro RNP. (PMID: 7489501) Van Horn D.J. … Wolin S.L. (RNA 1995) 1

Products for GC07M140095 Gene

Sources for GC07M140095 Gene

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