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Aliases for GC07M135666 Gene

Subcategory (RNA class) for GC07M135666 Gene

snRNA

Quality Score for this RNA gene is

2

Aliases for GC07M135666 Gene

No Aliases found

ORGUL Members for GC07M135666 Gene

No data available for External Ids for GC07M135666 Gene

Summaries for GC07M135666 Gene

GeneCards Summary for GC07M135666 Gene

GC07M135666 is an RNA Gene, and is affiliated with the snRNA class.

fRNAdb sequence ontologies for GC07M135666 Gene

  • U6_snRNA: U6 snRNA is a component of the spliceosome which is involved in splicing pre-mRNA. The putative secondary structure consensus base pairing is confined to a short 5' stem loop, but U6 snRNA is thought to form extensive base-pair interactions with U4 snRNA.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC07M135666 Gene

Genomics for GC07M135666 Gene

Regulatory Elements for GC07M135666 Gene

Enhancers for GC07M135666 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07G135661 1.4 ENCODE dbSUPER 0.7 +2.6 2582 3.8 CREB3L1 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 NFYC ZNF610 C7orf73 RPL15P11 ENSG00000273219 GC07M135666 RNU6-1154P
GH07G135669 1.1 Ensembl ENCODE dbSUPER 0.7 -4.7 -4748 1.8 HLF MAFG CEBPG ZNF316 JUND GATA3 ATF3 MAFK EMSY RPL15P11 C7orf73 FAM180A GC07M135666 RNU6-1154P GC07P135677
GH07G135666 0.7 Ensembl ENCODE 0.7 -1.3 -1342 0.6 ZNF512 CEBPG SPI1 C7orf73 GC07M135666 RNU6-1154P GC07P135677
GH07G135667 0.7 Ensembl 0.7 -0.7 -699 0.4 BCOR SOX5 SOX13 TEAD1 CEBPB ZMYM3 CEBPG TEAD3 IRF9 CEBPA ENSG00000273219 GC07M135666 RNU6-1154P GC07P135677
GH07G135672 1.2 Ensembl ENCODE dbSUPER 0.4 -7.5 -7505 1.7 CTCF TFAP4 ARNT CHD7 RAD21 ZNF664 SMC3 FOS STAT1 ZNF654 C7orf73 RPL15P11 FAM180A C7orf49 GC07P135677 GC07M135666 RNU6-1154P
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC07M135666 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC07M135666 Gene

Chromosome:
7
Start:
135,665,601 bp from pter
End:
135,665,702 bp from pter
Size:
102 bases
Orientation:
Minus strand

Genomic View for GC07M135666 Gene

Genes around GC07M135666 on UCSC Golden Path with GeneCards custom track

GC07M135666 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC07M135666 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC07M135666 Gene

Proteins for GC07M135666 Gene

Post-translational modifications for GC07M135666 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC07M135666 Gene

Domains & Families for GC07M135666 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC07M135666 Gene

Function for GC07M135666 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC07M135666 Gene

Localization for GC07M135666 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC07M135666 Gene

Pathways & Interactions for GC07M135666 Gene

SuperPathways for GC07M135666 Gene

No Data Available

Interacting Proteins for GC07M135666 Gene

Gene Ontology (GO) - Biological Process for GC07M135666 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC07M135666 Gene

Drugs & Compounds for GC07M135666 Gene

No Compound Related Data Available

Transcripts for GC07M135666 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC07M135666 Gene

No ASD Table

Relevant External Links for GC07M135666 Gene

GeneLoc Exon Structure for
GC07M135666

No data available for mRNA/cDNA for GC07M135666 Gene

Expression for GC07M135666 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC07M135666 Gene

Orthologs for GC07M135666 Gene

No data available for Orthologs and Evolution for GC07M135666 Gene

Paralogs for GC07M135666 Gene

No data available for Paralogs for GC07M135666 Gene

Variants for GC07M135666 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC07M135666 Gene

Disorders for GC07M135666 Gene

No disorders were found for GC07M135666 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC07M135666 Gene

Publications for GC07M135666 Gene

  1. The uRNA database. (PMID: 9016512) Zwieb C. (Nucleic Acids Res. 1997) 1
  2. Spliceosomal small nuclear RNAs of Tetrahymena thermophila and some possible snRNA-snRNA base-pairing interactions. (PMID: 1960724) Orum H. … Engberg J. (J. Mol. Biol. 1991) 1
  3. The spliceosomal snRNAs of Caenorhabditis elegans. (PMID: 2339054) Thomas J. … Blumenthal T. (Nucleic Acids Res. 1990) 1

Products for GC07M135666 Gene

Sources for GC07M135666 Gene

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