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Aliases for GC07M129961 Gene

Subcategory (RNA class) for GC07M129961 Gene

Y RNA

Quality Score for this RNA gene is

2

Aliases for GC07M129961 Gene

No Aliases found

ORGUL Members for GC07M129961 Gene

No data available for External Ids for GC07M129961 Gene

Summaries for GC07M129961 Gene

GeneCards Summary for GC07M129961 Gene

GC07M129961 is an RNA Gene, and is affiliated with the Y RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC07M129961 Gene

Genomics for GC07M129961 Gene

Regulatory Elements for GC07M129961 Gene

Enhancers for GC07M129961 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07G129957 2 FANTOM5 Ensembl ENCODE dbSUPER 0.7 +3.0 2968 2.5 HNRNPUL1 HDGF PKNOX1 FOXA2 CREB3L1 ARNT ARID4B SIN3A ZNF766 CBX5 ENSG00000273329 TNPO3 ENSG00000270953 UBE2H NRF1 GC07M129961 ENSG00000199516
GH07G129968 1.5 Ensembl ENCODE dbSUPER 0.4 -7.9 -7894 2.7 HDGF SIN3A TCF12 GATA2 KLF7 FOS ZHX2 REST ZNF592 ZNF579 GC07M129961 GC07P130029
GH07G129961 0.7 dbSUPER 0.7 +0.4 354 0.7 ZFP64 ZBTB11 ZNF426 ZNF394 ZBTB8A ZNF623 ZNF781 ATF2 ZNF518A ZNF697 UBE2H GC07M129961 ENSG00000199516
GH07G129955 1.2 ENCODE dbSUPER 0.4 +6.2 6179 1.0 ATF1 PKNOX1 CREB3L1 ARNT TCF12 ZNF121 CBX5 FOS MCM3 NCOA1 ENSG00000199516 GC07M129961
GH07G129975 0.8 ENCODE 0.4 -13.4 -13440 0.2 ELF3 PKNOX1 SAP130 ARID4B CEBPG ARID3A SCRT2 ZSCAN5C RELB IKZF2 GC07M129961 GC07P130029
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC07M129961 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC07M129961 Gene

Chromosome:
7
Start:
129,961,990 bp from pter
End:
129,962,076 bp from pter
Size:
87 bases
Orientation:
Minus strand

Genomic View for GC07M129961 Gene

Genes around GC07M129961 on UCSC Golden Path with GeneCards custom track

GC07M129961 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC07M129961 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC07M129961 Gene

ORGUL Member Location for GC07M129961 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC07M129961 Gene

Proteins for GC07M129961 Gene

Post-translational modifications for GC07M129961 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC07M129961 Gene

Domains & Families for GC07M129961 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC07M129961 Gene

Function for GC07M129961 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC07M129961 Gene

Localization for GC07M129961 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC07M129961 Gene

Pathways & Interactions for GC07M129961 Gene

SuperPathways for GC07M129961 Gene

No Data Available

Interacting Proteins for GC07M129961 Gene

Gene Ontology (GO) - Biological Process for GC07M129961 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC07M129961 Gene

Drugs & Compounds for GC07M129961 Gene

No Compound Related Data Available

Transcripts for GC07M129961 Gene

fRNAdb Secondary structures for GC07M129961 Gene

  • FR386623

Alternative Splicing Database (ASD) splice patterns (SP) for GC07M129961 Gene

No ASD Table

Relevant External Links for GC07M129961 Gene

GeneLoc Exon Structure for
GC07M129961

No data available for mRNA/cDNA for GC07M129961 Gene

Expression for GC07M129961 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC07M129961 Gene

Orthologs for GC07M129961 Gene

No data available for Orthologs and Evolution for GC07M129961 Gene

Paralogs for GC07M129961 Gene

No data available for Paralogs for GC07M129961 Gene

Variants for GC07M129961 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC07M129961 Gene

Disorders for GC07M129961 Gene

No disorders were found for GC07M129961 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC07M129961 Gene

Publications for GC07M129961 Gene

  1. NONCODE: an integrated knowledge database of non-coding RNAs. (PMID: 15608158) Liu C. … Chen R. (Nucleic Acids Res. 2005) 1
  2. Conserved features of Y RNAs: a comparison of experimentally derived secondary structures. (PMID: 10606662) Teunissen S.W. … Pruijn G.J. (Nucleic Acids Res. 2000) 1
  3. Ro ribonucleoproteins contribute to the resistance of Deinococcus radiodurans to ultraviolet irradiation. (PMID: 10766734) Chen X. … Wolin S.L. (Genes Dev. 2000) 1
  4. Caenorhabditis elegans embryos contain only one major species of Ro RNP. (PMID: 7489501) Van Horn D.J. … Wolin S.L. (RNA 1995) 1

Products for GC07M129961 Gene

Sources for GC07M129961 Gene

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