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Aliases for GC07M092702 Gene

Subcategory (RNA class) for GC07M092702 Gene

snRNA

Quality Score for this RNA gene is

2

Aliases for GC07M092702 Gene

No Aliases found

ORGUL Members for GC07M092702 Gene

No data available for External Ids for GC07M092702 Gene

Summaries for GC07M092702 Gene

GeneCards Summary for GC07M092702 Gene

GC07M092702 is an RNA Gene, and is affiliated with the snRNA class.

fRNAdb sequence ontologies for GC07M092702 Gene

  • U6_snRNA: U6 snRNA is a component of the spliceosome which is involved in splicing pre-mRNA. The putative secondary structure consensus base pairing is confined to a short 5' stem loop, but U6 snRNA is thought to form extensive base-pair interactions with U4 snRNA.

Additional gene information for GC07M092702 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC07M092702 Gene

Genomics for GC07M092702 Gene

Regulatory Elements for GC07M092702 Gene

Enhancers for GC07M092702 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07H092693 2.5 Ensembl ENCODE dbSUPER 0.7 +4.9 4895 7 FOXA2 ATF1 ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 SLC30A9 GATAD1 ENSG00000244055 CDK6 GC07M092702 RNU6-10P GC07M092611
GH07H092746 2.8 FANTOM5 Ensembl ENCODE dbSUPER 0.2 -49.9 -49898 10 FOXA2 ARID4B SIN3A BRCA1 TCF12 FOS ATF7 NFYC REST PPARG ENSG00000243107 KRIT1 PEX1 CDK6 RNU6-10P GC07M092702 LOC101927497
GH07H092681 1.3 Ensembl ENCODE dbSUPER 0.4 +18.1 18116 4 ELF3 SOX13 FOXA2 SAP130 ZNF175 CEBPG ZNF766 GATA3 CREM SOX5 FAM133B ENSG00000243107 KRIT1 GATAD1 PEX1 AKAP9 CDK6 LOC101927497 MTERF1 ENSG00000244055
GH07H092716 1.3 Ensembl ENCODE dbSUPER 0.4 -17.5 -17464 5 CTCF IRF2 JUN YY1 POLR2A EED ETV6 RUNX3 IKZF2 HOMEZ CDK6 LOC101927497 GC07M092702 RNU6-10P
GH07H092702 0.7 dbSUPER 0.7 -4.1 -4131 7 JUNB DPF2 BATF ATF2 ZNF507 SSRP1 BCL11A IKZF1 CEBPA HNF4A KRIT1 CDK6 PEX1 ENSG00000243107 FAM133B LOC101927497 AKAP9 GATAD1 MTERF1 GC07M092702
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC07M092702 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC07M092702 Gene

Chromosome:
7
Start:
92,701,707 bp from pter
End:
92,701,814 bp from pter
Size:
108 bases
Orientation:
Minus strand

Genomic View for GC07M092702 Gene

Genes around GC07M092702 on UCSC Golden Path with GeneCards custom track

GC07M092702 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC07M092702 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC07M092702 Gene

Proteins for GC07M092702 Gene

Post-translational modifications for GC07M092702 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC07M092702 Gene

Domains & Families for GC07M092702 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC07M092702 Gene

Function for GC07M092702 Gene

Phenotypes From GWAS Catalog for GC07M092702 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC07M092702 Gene

Localization for GC07M092702 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC07M092702 Gene

Pathways & Interactions for GC07M092702 Gene

SuperPathways for GC07M092702 Gene

No Data Available

Interacting Proteins for GC07M092702 Gene

Gene Ontology (GO) - Biological Process for GC07M092702 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC07M092702 Gene

Drugs & Compounds for GC07M092702 Gene

No Compound Related Data Available

Transcripts for GC07M092702 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC07M092702 Gene

No ASD Table

Relevant External Links for GC07M092702 Gene

GeneLoc Exon Structure for
GC07M092702

No data available for mRNA/cDNA for GC07M092702 Gene

Expression for GC07M092702 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC07M092702 Gene

Orthologs for GC07M092702 Gene

No data available for Orthologs and Evolution for GC07M092702 Gene

Paralogs for GC07M092702 Gene

No data available for Paralogs for GC07M092702 Gene

Variants for GC07M092702 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC07M092702 Gene

Disorders for GC07M092702 Gene

No disorders were found for GC07M092702 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC07M092702 Gene

Publications for GC07M092702 Gene

  1. NONCODE: an integrated knowledge database of non-coding RNAs. (PMID: 15608158) Liu C … Chen R (Nucleic acids research 2005) 1
  2. The uRNA database. (PMID: 9016512) Zwieb C (Nucleic acids research 1997) 1
  3. The RNA world of the nucleolus: two major families of small RNAs defined by different box elements with related functions. (PMID: 8797828) Balakin AG … Fournier MJ (Cell 1996) 1
  4. Spliceosomal small nuclear RNAs of Tetrahymena thermophila and some possible snRNA-snRNA base-pairing interactions. (PMID: 1960724) Orum H … Engberg J (Journal of molecular biology 1991) 1
  5. The spliceosomal snRNAs of Caenorhabditis elegans. (PMID: 2339054) Thomas J … Blumenthal T (Nucleic acids research 1990) 1

Products for GC07M092702 Gene

Sources for GC07M092702 Gene

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