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Aliases for GC07M069508 Gene

Subcategory (RNA class) for GC07M069508 Gene

Y RNA

Quality Score for this RNA gene is

2

Aliases for GC07M069508 Gene

No Aliases found

ORGUL Members for GC07M069508 Gene

No data available for External Ids for GC07M069508 Gene

Summaries for GC07M069508 Gene

GeneCards Summary for GC07M069508 Gene

GC07M069508 is an RNA Gene, and is affiliated with the Y RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC07M069508 Gene

Genomics for GC07M069508 Gene

Regulatory Elements for GC07M069508 Gene

Enhancers for GC07M069508 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07G069503 0.6 ENCODE 0.7 +3.9 3893 0.2 HIC1 GLIS2 RFX1 ZNF629 ZNF2 PRDM1 RNU6-229P ENSG00000200857 GC07M069508 ENSG00000225718
GH07G069493 0.6 ENCODE 0.4 +13.7 13661 0.8 EED IKZF1 MAX IKZF2 MYC SPI1 RNU6-229P ENSG00000200857 GC07M069508 ENSG00000225718
GH07G069517 0.6 ENCODE 0.4 -10.9 -10872 1.0 HDAC2 TEAD4 CTBP2 HNF4A REST EZH2 RNU6-229P ENSG00000200857 GC07M069508 GC07M069536
GH07G069534 0.6 ENCODE 0.3 -26.9 -26948 0.2 NFIC EGR1 CREB3L1 NR2C1 MAFK NR2C2 GC07M069536 ENSG00000200857 GC07M069508
GH07G069457 0.9 Ensembl ENCODE 0.2 +49.5 49475 1.2 PKNOX1 MAZ TEAD4 NR3C1 RAD21 NR2F2 YY1 ZFHX2 ZNF341 GLIS1 ENSG00000225718 GC07M069508 ENSG00000200857
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC07M069508 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC07M069508 Gene

Chromosome:
7
Start:
69,507,511 bp from pter
End:
69,507,622 bp from pter
Size:
112 bases
Orientation:
Minus strand

Genomic View for GC07M069508 Gene

Genes around GC07M069508 on UCSC Golden Path with GeneCards custom track

GC07M069508 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC07M069508 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC07M069508 Gene

ORGUL Member Location for GC07M069508 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC07M069508 Gene

Proteins for GC07M069508 Gene

Post-translational modifications for GC07M069508 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC07M069508 Gene

Domains & Families for GC07M069508 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC07M069508 Gene

Function for GC07M069508 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC07M069508 Gene

Localization for GC07M069508 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC07M069508 Gene

Pathways & Interactions for GC07M069508 Gene

SuperPathways for GC07M069508 Gene

No Data Available

Interacting Proteins for GC07M069508 Gene

Gene Ontology (GO) - Biological Process for GC07M069508 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC07M069508 Gene

Drugs & Compounds for GC07M069508 Gene

No Compound Related Data Available

Transcripts for GC07M069508 Gene

fRNAdb Secondary structures for GC07M069508 Gene

  • FR178821
  • FR322836

Alternative Splicing Database (ASD) splice patterns (SP) for GC07M069508 Gene

No ASD Table

Relevant External Links for GC07M069508 Gene

GeneLoc Exon Structure for
GC07M069508

No data available for mRNA/cDNA for GC07M069508 Gene

Expression for GC07M069508 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC07M069508 Gene

Orthologs for GC07M069508 Gene

No data available for Orthologs and Evolution for GC07M069508 Gene

Paralogs for GC07M069508 Gene

No data available for Paralogs for GC07M069508 Gene

Variants for GC07M069508 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC07M069508 Gene

Disorders for GC07M069508 Gene

No disorders were found for GC07M069508 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC07M069508 Gene

Publications for GC07M069508 Gene

  1. NONCODE: an integrated knowledge database of non-coding RNAs. (PMID: 15608158) Liu C. … Chen R. (Nucleic Acids Res. 2005) 1
  2. Conserved features of Y RNAs: a comparison of experimentally derived secondary structures. (PMID: 10606662) Teunissen S.W. … Pruijn G.J. (Nucleic Acids Res. 2000) 1
  3. Ro ribonucleoproteins contribute to the resistance of Deinococcus radiodurans to ultraviolet irradiation. (PMID: 10766734) Chen X. … Wolin S.L. (Genes Dev. 2000) 1
  4. Caenorhabditis elegans embryos contain only one major species of Ro RNP. (PMID: 7489501) Van Horn D.J. … Wolin S.L. (RNA 1995) 1

Products for GC07M069508 Gene

Sources for GC07M069508 Gene

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