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Aliases for GC07M066788 Gene

Subcategory (RNA class) for GC07M066788 Gene

snoRNA

Quality Score for this RNA gene is

1

Aliases for GC07M066788 Gene

No Aliases found

ORGUL Members for GC07M066788 Gene

No data available for External Ids for GC07M066788 Gene

Summaries for GC07M066788 Gene

GeneCards Summary for GC07M066788 Gene

GC07M066788 is an RNA Gene, and is affiliated with the snoRNA class.

fRNAdb sequence ontologies for GC07M066788 Gene

  • snoRNA: A snoRNA (small nucleolar RNA) is any one of a class of small RNAs that are associated with the eukaryotic nucleus as components of small nucleolar ribonucleoproteins. They participate in the processing or modifications of many RNAs, mostly ribosomal RNAs (rRNAs) though snoRNAs are also known to target other classes of RNA, including spliceosomal RNAs, tRNAs, and mRNAs via a stretch of sequence that is complementary to a sequence in the targeted RNA.

Additional gene information for GC07M066788 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC07M066788 Gene

Genomics for GC07M066788 Gene

Regulatory Elements for GC07M066788 Gene

Enhancers for GC07M066788 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07H066757 1.4 FANTOM5 Ensembl ENCODE 0.3 +29.5 29464 2 CTCF HLF CEBPB JUNB BATF NR2F2 GABPA NFIL3 POLR2A CEBPA LOC100996437 RABGEF1 GS1-124K5.4 CRCP KCTD7 ENSG00000271064 GC07M066788
GH07H066781 0.9 ENCODE 0.4 +5.2 5239 3 ELF3 FOXA2 ARID4B RARA TCF12 FOS CREM MIXL1 PPARG NFIL3 RABGEF1 KCTD7 ENSG00000229180 GC07M066788 ENSG00000271064
GH07H066779 0.6 ENCODE 0.4 +8.3 8291 0 GATAD2A NFIL3 ZNF3 FOXA2 ZNF341 HNF4A KDM1A VKORC1L1 RABGEF1 GS1-124K5.4 KCTD7 LOC644794 GC07M066788 ENSG00000271064
GH07H066749 0.7 ENCODE 0.3 +37.0 37025 2 HDGF BATF CTBP1 GATA3 EGR1 FOS ATF7 CREM SMARCE1 JUNB LOC100996437 RABGEF1 ENSG00000271064 GC07M066788
GH07H066769 0.4 Ensembl 0.4 +19.4 19364 0 SPI1 RABGEF1 KCTD7 GC07M066788 ENSG00000271064
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC07M066788 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC07M066788 Gene

Chromosome:
7
Start:
66,788,354 bp from pter
End:
66,788,464 bp from pter
Size:
111 bases
Orientation:
Minus strand

Genomic View for GC07M066788 Gene

Genes around GC07M066788 on UCSC Golden Path with GeneCards custom track

GC07M066788 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC07M066788 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC07M066788 Gene

Proteins for GC07M066788 Gene

Post-translational modifications for GC07M066788 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC07M066788 Gene

Domains & Families for GC07M066788 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC07M066788 Gene

Function for GC07M066788 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC07M066788 Gene

Localization for GC07M066788 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC07M066788 Gene

Pathways & Interactions for GC07M066788 Gene

SuperPathways for GC07M066788 Gene

No Data Available

Interacting Proteins for GC07M066788 Gene

Gene Ontology (GO) - Biological Process for GC07M066788 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC07M066788 Gene

Drugs & Compounds for GC07M066788 Gene

No Compound Related Data Available

Transcripts for GC07M066788 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC07M066788 Gene

No ASD Table

Relevant External Links for GC07M066788 Gene

GeneLoc Exon Structure for
GC07M066788

No data available for mRNA/cDNA for GC07M066788 Gene

Expression for GC07M066788 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC07M066788 Gene

Orthologs for GC07M066788 Gene

No data available for Orthologs and Evolution for GC07M066788 Gene

Paralogs for GC07M066788 Gene

No data available for Paralogs for GC07M066788 Gene

Variants for GC07M066788 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC07M066788 Gene

Disorders for GC07M066788 Gene

No disorders were found for GC07M066788 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC07M066788 Gene

Publications for GC07M066788 Gene

  1. NONCODE: an integrated knowledge database of non-coding RNAs. (PMID: 15608158) Liu C … Chen R (Nucleic acids research 2005) 1
  2. Archaeal homologs of eukaryotic methylation guide small nucleolar RNAs: lessons from the Pyrococcus genomes. (PMID: 10736225) Gaspin C … Bachellerie JP (Journal of molecular biology 2000) 1
  3. The RNA world of the nucleolus: two major families of small RNAs defined by different box elements with related functions. (PMID: 8797828) Balakin AG … Fournier MJ (Cell 1996) 1

Products for GC07M066788 Gene

Sources for GC07M066788 Gene

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