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Aliases for GC07M040085 Gene

Subcategory (RNA class) for GC07M040085 Gene

snoRNA

Quality Score for this RNA gene is

2

Aliases for GC07M040085 Gene

No Aliases found

ORGUL Members for GC07M040085 Gene

No data available for External Ids for GC07M040085 Gene

Summaries for GC07M040085 Gene

GeneCards Summary for GC07M040085 Gene

GC07M040085 is an RNA Gene, and is affiliated with the snoRNA class.

fRNAdb sequence ontologies for GC07M040085 Gene

  • C_D_box_snoRNA: Most box C/D snoRNAs also contain long (>10 nt) sequences complementary to rRNA. Boxes C and D, as well as boxes C' and D', are usually located in close proximity, and form a structure known as the box C/D motif. This motif is important for snoRNA stability, processing, nucleolar targeting and function. A small number of box C/D snoRNAs are involved in rRNA processing; most, however, are known or predicted to serve as guide RNAs in ribose methylation of rRNA. Targeting involves direct base pairing of the snoRNA at the rRNA site to be modified and selection of a rRNA nucleotide a fixed distance from box D or D'.

Additional gene information for GC07M040085 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC07M040085 Gene

Genomics for GC07M040085 Gene

Regulatory Elements for GC07M040085 Gene

Enhancers for GC07M040085 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07H040095 0.8 ENCODE 0.4 -9.7 -9650 0 SOX13 MAX CEBPG ZNF384 RAD21 RARA HNF4G NR2F6 CREM MIXL1 GC07P040095 GC07M040085
GH07H040089 0.4 FANTOM5 0.7 -4.4 -4414 0 ZSCAN4 GC07M040085 GC07P040095
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC07M040085 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC07M040085 Gene

Chromosome:
7
Start:
40,085,765 bp from pter
End:
40,085,827 bp from pter
Size:
63 bases
Orientation:
Minus strand

Genomic View for GC07M040085 Gene

Genes around GC07M040085 on UCSC Golden Path with GeneCards custom track

GC07M040085 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC07M040085 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC07M040085 Gene

Proteins for GC07M040085 Gene

Post-translational modifications for GC07M040085 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC07M040085 Gene

Domains & Families for GC07M040085 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC07M040085 Gene

Function for GC07M040085 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC07M040085 Gene

Localization for GC07M040085 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC07M040085 Gene

Pathways & Interactions for GC07M040085 Gene

SuperPathways for GC07M040085 Gene

No Data Available

Interacting Proteins for GC07M040085 Gene

Gene Ontology (GO) - Biological Process for GC07M040085 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC07M040085 Gene

Drugs & Compounds for GC07M040085 Gene

No Compound Related Data Available

Transcripts for GC07M040085 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC07M040085 Gene

No ASD Table

Relevant External Links for GC07M040085 Gene

GeneLoc Exon Structure for
GC07M040085

No data available for mRNA/cDNA for GC07M040085 Gene

Expression for GC07M040085 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC07M040085 Gene

Orthologs for GC07M040085 Gene

No data available for Orthologs and Evolution for GC07M040085 Gene

Paralogs for GC07M040085 Gene

No data available for Paralogs for GC07M040085 Gene

Variants for GC07M040085 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC07M040085 Gene

Disorders for GC07M040085 Gene

No disorders were found for GC07M040085 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC07M040085 Gene

Publications for GC07M040085 Gene

  1. Identification of tandemly-repeated C/D snoRNA genes at the imprinted human 14q32 domain reminiscent of those at the Prader-Willi/Angelman syndrome region. (PMID: 12045206) Cavaillé J … Bachellerie JP (Human molecular genetics 2002) 1

Products for GC07M040085 Gene

Sources for GC07M040085 Gene

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