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Aliases for GC07M006212 Gene

Subcategory (RNA class) for GC07M006212 Gene

Y RNA

Quality Score for this RNA gene is

2

Aliases for GC07M006212 Gene

No Aliases found

ORGUL Members for GC07M006212 Gene

No data available for External Ids for GC07M006212 Gene

Summaries for GC07M006212 Gene

GeneCards Summary for GC07M006212 Gene

GC07M006212 is an RNA Gene, and is affiliated with the Y RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC07M006212 Gene

Genomics for GC07M006212 Gene

Regulatory Elements for GC07M006212 Gene

Enhancers for GC07M006212 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07G006220 1.2 Ensembl ENCODE 0.4 -9.0 -8989 1.5 HDAC1 PKNOX1 ATF1 TBL1XR1 ARNT TCF12 ZNF766 GATA2 ELK1 FOS PMS2CL GC07M006212 ENSG00000202273 GC07M006227
GH07G006232 1.2 Ensembl ENCODE 0.4 -19.9 -19946 1.0 HDGF CREB3L1 SIN3A DMAP1 ZNF207 KLF13 REST ZNF592 SREBF1 MXD3 CYTH3 GC07M006227 ENSG00000202273 GC07M006212
GH07G006225 1.1 Ensembl ENCODE 0.4 -15.2 -15157 4.5 HDAC1 CBX3 RB1 SIN3A ZBTB40 RAD21 TCF12 ZNF121 GATA2 EGR1 CYTH3 EIF2AK1 GC07M006212 ENSG00000202273 GC07M006227
GH07G006246 1.4 Ensembl ENCODE dbSUPER 0.3 -37.6 -37600 6.7 PKNOX1 FEZF1 ZNF121 FOS MCM3 JUNB TBX21 ZNF592 MEF2D NBN PMS2 SLC29A4 ZDHHC4 GC07M006227 GC07M006212 ENSG00000202273
GH07G006245 0.7 ENCODE dbSUPER 0.3 -33.0 -33024 0.2 BCOR ZBTB33 ZIC2 GC07M006227 GC07M006212 ENSG00000202273
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC07M006212 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC07M006212 Gene

Chromosome:
7
Start:
6,212,638 bp from pter
End:
6,212,740 bp from pter
Size:
103 bases
Orientation:
Minus strand

Genomic View for GC07M006212 Gene

Genes around GC07M006212 on UCSC Golden Path with GeneCards custom track

GC07M006212 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC07M006212 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC07M006212 Gene

ORGUL Member Location for GC07M006212 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC07M006212 Gene

Proteins for GC07M006212 Gene

Post-translational modifications for GC07M006212 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC07M006212 Gene

Domains & Families for GC07M006212 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC07M006212 Gene

Function for GC07M006212 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC07M006212 Gene

Localization for GC07M006212 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC07M006212 Gene

Pathways & Interactions for GC07M006212 Gene

SuperPathways for GC07M006212 Gene

No Data Available

Interacting Proteins for GC07M006212 Gene

Gene Ontology (GO) - Biological Process for GC07M006212 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC07M006212 Gene

Drugs & Compounds for GC07M006212 Gene

No Compound Related Data Available

Transcripts for GC07M006212 Gene

fRNAdb Secondary structures for GC07M006212 Gene

  • FR144860
  • FR340923

Alternative Splicing Database (ASD) splice patterns (SP) for GC07M006212 Gene

No ASD Table

Relevant External Links for GC07M006212 Gene

GeneLoc Exon Structure for
GC07M006212

No data available for mRNA/cDNA for GC07M006212 Gene

Expression for GC07M006212 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC07M006212 Gene

Orthologs for GC07M006212 Gene

No data available for Orthologs and Evolution for GC07M006212 Gene

Paralogs for GC07M006212 Gene

No data available for Paralogs for GC07M006212 Gene

Variants for GC07M006212 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC07M006212 Gene

Disorders for GC07M006212 Gene

No disorders were found for GC07M006212 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC07M006212 Gene

Publications for GC07M006212 Gene

  1. NONCODE: an integrated knowledge database of non-coding RNAs. (PMID: 15608158) Liu C. … Chen R. (Nucleic Acids Res. 2005) 1
  2. Conserved features of Y RNAs: a comparison of experimentally derived secondary structures. (PMID: 10606662) Teunissen S.W. … Pruijn G.J. (Nucleic Acids Res. 2000) 1
  3. Ro ribonucleoproteins contribute to the resistance of Deinococcus radiodurans to ultraviolet irradiation. (PMID: 10766734) Chen X. … Wolin S.L. (Genes Dev. 2000) 1
  4. Caenorhabditis elegans embryos contain only one major species of Ro RNP. (PMID: 7489501) Van Horn D.J. … Wolin S.L. (RNA 1995) 1

Products for GC07M006212 Gene

Sources for GC07M006212 Gene

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