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Aliases for GC07M006175 Gene

Subcategory (RNA class) for GC07M006175 Gene

Y RNA

Quality Score for this RNA gene is

2

Aliases for GC07M006175 Gene

No Aliases found

ORGUL Members for GC07M006175 Gene

No data available for External Ids for GC07M006175 Gene

Summaries for GC07M006175 Gene

GeneCards Summary for GC07M006175 Gene

GC07M006175 is an RNA Gene, and is affiliated with the Y RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC07M006175 Gene

Genomics for GC07M006175 Gene

Regulatory Elements for GC07M006175 Gene

Enhancers for GC07M006175 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07G006171 0.7 ENCODE 0.7 +3.1 3064 2.1 NFIB BACH1 MAFG RBBP5 ZNF316 POLR2A IKZF1 NFE2L1 NFE2 EMSY PIR52510 GC07M006175
GH07G006175 0.6 ENCODE 0.7 -0.6 -561 0.2 SREBF1 JUND BHLHE40 CEBPB FOSL2 ZBTB33 FOS DPF2 EIF2AK1 GC07M006175 GC07M006206
GH07G006198 0.9 ENCODE 0.3 -23.7 -23734 0.9 ELF3 FOXA2 MLX ARID4B RARA FOS CREM THAP11 MIXL1 SP5 ENSG00000207217 EIF2AK1 GC07M006206 GC07M006175
GH07G006202 0.5 ENCODE 0.3 -27.0 -27021 0.2 ZBTB33 PRDM10 ZNF18 ENSG00000207217 GC07M006206 GC07M006175
GH07G006178 0.2 ENCODE 0.7 -3.4 -3353 0.8 EIF2AK1 PMS2 GC07M006175 GC07M006206
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC07M006175 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC07M006175 Gene

Chromosome:
7
Start:
6,175,212 bp from pter
End:
6,175,304 bp from pter
Size:
93 bases
Orientation:
Minus strand

Genomic View for GC07M006175 Gene

Genes around GC07M006175 on UCSC Golden Path with GeneCards custom track

GC07M006175 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC07M006175 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC07M006175 Gene

ORGUL Member Location for GC07M006175 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC07M006175 Gene

Proteins for GC07M006175 Gene

Post-translational modifications for GC07M006175 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC07M006175 Gene

Domains & Families for GC07M006175 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC07M006175 Gene

Function for GC07M006175 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC07M006175 Gene

Localization for GC07M006175 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC07M006175 Gene

Pathways & Interactions for GC07M006175 Gene

SuperPathways for GC07M006175 Gene

No Data Available

Interacting Proteins for GC07M006175 Gene

Gene Ontology (GO) - Biological Process for GC07M006175 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC07M006175 Gene

Drugs & Compounds for GC07M006175 Gene

No Compound Related Data Available

Transcripts for GC07M006175 Gene

fRNAdb Secondary structures for GC07M006175 Gene

  • FR117851
  • FR294892

Alternative Splicing Database (ASD) splice patterns (SP) for GC07M006175 Gene

No ASD Table

Relevant External Links for GC07M006175 Gene

GeneLoc Exon Structure for
GC07M006175

No data available for mRNA/cDNA for GC07M006175 Gene

Expression for GC07M006175 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC07M006175 Gene

Orthologs for GC07M006175 Gene

No data available for Orthologs and Evolution for GC07M006175 Gene

Paralogs for GC07M006175 Gene

No data available for Paralogs for GC07M006175 Gene

Variants for GC07M006175 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC07M006175 Gene

Disorders for GC07M006175 Gene

No disorders were found for GC07M006175 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC07M006175 Gene

Publications for GC07M006175 Gene

  1. NONCODE: an integrated knowledge database of non-coding RNAs. (PMID: 15608158) Liu C. … Chen R. (Nucleic Acids Res. 2005) 1
  2. Conserved features of Y RNAs: a comparison of experimentally derived secondary structures. (PMID: 10606662) Teunissen S.W. … Pruijn G.J. (Nucleic Acids Res. 2000) 1
  3. Ro ribonucleoproteins contribute to the resistance of Deinococcus radiodurans to ultraviolet irradiation. (PMID: 10766734) Chen X. … Wolin S.L. (Genes Dev. 2000) 1
  4. Caenorhabditis elegans embryos contain only one major species of Ro RNP. (PMID: 7489501) Van Horn D.J. … Wolin S.L. (RNA 1995) 1

Products for GC07M006175 Gene

Sources for GC07M006175 Gene

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