Free for academic non-profit institutions. Other users need a Commercial license

Aliases for GC07M005529 Gene

Subcategory (RNA class) for GC07M005529 Gene

undefined

Quality Score for this RNA gene is

6

Aliases for GC07M005529 Gene

No Aliases found

ORGUL Members for GC07M005529 Gene

No data available for External Ids for GC07M005529 Gene

Summaries for GC07M005529 Gene

GeneCards Summary for GC07M005529 Gene

GC07M005529 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC07M005529 Gene

  • ncRNA: An RNA transcript that does not encode for a protein rather the RNA molecule is the gene product.

View fRNAdb secondary structures for GC07M005529

Additional gene information for GC07M005529 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC07M005529 Gene

Genomics for GC07M005529 Gene

Regulatory Elements for GC07M005529 Gene

Enhancers for GC07M005529 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07H005523 1.8 FANTOM5 ENCODE dbSUPER 0.7 +0.2 166 11 HNRNPUL1 HDGF PKNOX1 MLX ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 USP42 ANKRD61 RNF216 AP5Z1 CCZ1 RBAK RNF216P1 TNRC18 FBXL18 WIPI2
GH07H005551 2 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -26.1 -26114 7 HDGF PKNOX1 ARNT ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 ZBTB7B AP5Z1 ANKRD61 TNRC18 USP42 ZNF890P EIF2AK1 CCZ1 ACTB WIPI2 ENSG00000272719
GH07H005538 1.4 FANTOM5 Ensembl ENCODE 0.4 -9.2 -9164 0 HDGF RB1 ZSCAN4 BMI1 BATF ATF7 ETV6 RUNX3 CREM IKZF2 GC07M005529 GC07M005530 ENSG00000272719
GH07H005548 1.4 Ensembl ENCODE dbSUPER 0.3 -20.1 -20146 2 HDGF PKNOX1 SIN3A ELK1 FOS ZNF592 SMARCA4 STAT3 KDM1A WT1 USP42 ANKRD61 RBAK ENSG00000272719 GC07M005529 GC07M005530
GH07H005541 1 ENCODE dbSUPER 0.4 -12.2 -12185 1 BCOR HDGF PKNOX1 PTBP1 BACH1 ZMYM3 EBF1 ZKSCAN1 RELA EED ENSG00000272719 GC07M005529 GC07M005530
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC07M005529 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC07M005529 Gene

Chromosome:
7
Start:
5,529,606 bp from pter
End:
5,529,663 bp from pter
Size:
58 bases
Orientation:
Minus strand

Genomic View for GC07M005529 Gene

Genes around GC07M005529 on UCSC Golden Path with GeneCards custom track

GC07M005529 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC07M005529 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC07M005529 Gene

ORGUL Member Location for GC07M005529 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC07M005529 Gene

Proteins for GC07M005529 Gene

Post-translational modifications for GC07M005529 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC07M005529 Gene

Domains & Families for GC07M005529 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC07M005529 Gene

Function for GC07M005529 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC07M005529 Gene

Localization for GC07M005529 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC07M005529 Gene

Pathways & Interactions for GC07M005529 Gene

SuperPathways for GC07M005529 Gene

No Data Available

Interacting Proteins for GC07M005529 Gene

Gene Ontology (GO) - Biological Process for GC07M005529 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC07M005529 Gene

Drugs & Compounds for GC07M005529 Gene

No Compound Related Data Available

Transcripts for GC07M005529 Gene

fRNAdb Secondary structures for GC07M005529 Gene

  • FR021843

Alternative Splicing Database (ASD) splice patterns (SP) for GC07M005529 Gene

No ASD Table

Relevant External Links for GC07M005529 Gene

GeneLoc Exon Structure for
GC07M005529

No data available for mRNA/cDNA for GC07M005529 Gene

Expression for GC07M005529 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC07M005529 Gene

Orthologs for GC07M005529 Gene

No data available for Orthologs and Evolution for GC07M005529 Gene

Paralogs for GC07M005529 Gene

No data available for Paralogs for GC07M005529 Gene

Variants for GC07M005529 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC07M005529 Gene

Disorders for GC07M005529 Gene

No disorders were found for GC07M005529 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC07M005529 Gene

Publications for GC07M005529 Gene

  1. The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts. (PMID: 18089548) Genome Information Integration Project And H-Invitational 2 … Gojobori T (Nucleic acids research 2008) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Integrative annotation of 21,037 human genes validated by full-length cDNA clones. (PMID: 15103394) Imanishi T … Sugano S (PLoS biology 2004) 1

Products for GC07M005529 Gene

Sources for GC07M005529 Gene

Content
Loading form....