Free for academic non-profit institutions. Other users need a Commercial license

Aliases for GC07M005529 Gene

Subcategory (RNA class) for GC07M005529 Gene

undefined

Quality Score for this RNA gene is

6

Aliases for GC07M005529 Gene

No Aliases found

ORGUL Members for GC07M005529 Gene

No data available for External Ids for GC07M005529 Gene

Summaries for GC07M005529 Gene

GeneCards Summary for GC07M005529 Gene

GC07M005529 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC07M005529 Gene

  • ncRNA: An RNA transcript that does not encode for a protein rather the RNA molecule is the gene product.

View fRNAdb secondary structures for GC07M005529

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC07M005529 Gene

Genomics for GC07M005529 Gene

Regulatory Elements for GC07M005529 Gene

Enhancers for GC07M005529 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07G005523 1.8 FANTOM5 ENCODE dbSUPER 0.7 +0.2 166 11.1 CREB3L1 MLX AGO1 FEZF1 DMAP1 YY1 ZNF143 ZNF263 SP3 NFYC CCZ1 AP5Z1 ANKRD61 USP42 FBXL18 WIPI2 ACTB RBAK GC07M005528 GC07M005529
GH07G005551 2.1 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -26.1 -26114 7.6 CREB3L1 AGO1 ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 USP42 ANKRD61 AP5Z1 ZNF890P EIF2AK1 CCZ1 ACTB WIPI2 ENSG00000272719 GC07M005529
GH07G005538 1.5 FANTOM5 Ensembl ENCODE 0.4 -9.2 -9164 1.0 HDAC1 HDGF NFRKB ZSCAN4 BMI1 GATA2 EGR1 ELK1 RELB ETV6 GC07M005529 GC07M005530 ENSG00000272719
GH07G005548 1.5 Ensembl ENCODE dbSUPER 0.3 -20.1 -20146 2.5 HDGF PKNOX1 ZFP64 SIN3A ARID4B ELK1 FOS KLF13 ZNF592 SMARCA4 ENSG00000272719 GC07M005530 GC07M005529
GH07G005541 1.1 ENCODE dbSUPER 0.4 -12.2 -12185 1.3 HDGF PKNOX1 PTBP1 NFXL1 ZNF143 RELB IKZF2 SMARCA5 GATAD2B TBX21 GC07M005529 GC07M005530 ENSG00000272719
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC07M005529 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC07M005529 Gene

Chromosome:
7
Start:
5,529,606 bp from pter
End:
5,529,663 bp from pter
Size:
58 bases
Orientation:
Minus strand

Genomic View for GC07M005529 Gene

Genes around GC07M005529 on UCSC Golden Path with GeneCards custom track

GC07M005529 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC07M005529 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC07M005529 Gene

ORGUL Member Location for GC07M005529 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC07M005529 Gene

Proteins for GC07M005529 Gene

Post-translational modifications for GC07M005529 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC07M005529 Gene

Domains & Families for GC07M005529 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC07M005529 Gene

Function for GC07M005529 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC07M005529 Gene

Localization for GC07M005529 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC07M005529 Gene

Pathways & Interactions for GC07M005529 Gene

SuperPathways for GC07M005529 Gene

No Data Available

Interacting Proteins for GC07M005529 Gene

Gene Ontology (GO) - Biological Process for GC07M005529 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC07M005529 Gene

Drugs & Compounds for GC07M005529 Gene

No Compound Related Data Available

Transcripts for GC07M005529 Gene

fRNAdb Secondary structures for GC07M005529 Gene

  • FR021843

Alternative Splicing Database (ASD) splice patterns (SP) for GC07M005529 Gene

No ASD Table

Relevant External Links for GC07M005529 Gene

GeneLoc Exon Structure for
GC07M005529

No data available for mRNA/cDNA for GC07M005529 Gene

Expression for GC07M005529 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC07M005529 Gene

Orthologs for GC07M005529 Gene

No data available for Orthologs and Evolution for GC07M005529 Gene

Paralogs for GC07M005529 Gene

No data available for Paralogs for GC07M005529 Gene

Variants for GC07M005529 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC07M005529 Gene

Disorders for GC07M005529 Gene

No disorders were found for GC07M005529 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC07M005529 Gene

Publications for GC07M005529 Gene

  1. The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts. (PMID: 18089548) . … Gojobori T. (Nucleic Acids Res. 2008) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1
  3. Integrative annotation of 21,037 human genes validated by full-length cDNA clones. (PMID: 15103394) Imanishi T. … Sugano S. (PLoS Biol. 2004) 1

Products for GC07M005529 Gene

Sources for GC07M005529 Gene

Content
Loading form....