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Aliases for GC06P163841 Gene

Subcategory (RNA class) for GC06P163841 Gene

SRP

Quality Score for this RNA gene is

2

Aliases for GC06P163841 Gene

No Aliases found

ORGUL Members for GC06P163841 Gene

No data available for External Ids for GC06P163841 Gene

Summaries for GC06P163841 Gene

GeneCards Summary for GC06P163841 Gene

GC06P163841 is an RNA Gene, and is affiliated with the SRP RNA class.

Additional gene information for GC06P163841 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC06P163841 Gene

Genomics for GC06P163841 Gene

Regulatory Elements for GC06P163841 Gene

Enhancers for GC06P163841 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06H163837 1 Ensembl ENCODE 0.7 -2.7 -2672 1 L3MBTL2 ARNT FEZF1 ZNF488 ZNF384 ZIC2 OSR2 ZFHX2 GLIS1 MYNN GC06P163841 LOC105378104
GH06H163814 1 Ensembl ENCODE 0.3 -25.8 -25846 1 ESRRA ATF1 JUN CEBPG FOSL1 GATA3 CTBP1 FOS TRIM24 ATF7 GC06P163841 LOC105378104
GH06H163838 0.4 ENCODE 0.7 -3.3 -3259 0 ZNF384 GC06P163841 LOC105378104
GH06H163776 1.3 FANTOM5 ENCODE 0.2 -62.8 -62847 1 HNRNPUL1 PKNOX1 ATF1 ARNT TCF12 ZNF766 GATA2 ELK1 ATF7 NCOA1 LOC105378104 GC06P163841
GH06H163745 1.2 Ensembl ENCODE 0.2 -94.7 -94728 1 PKNOX1 ATF1 ARNT INSM2 KLF17 FEZF1 ZEB1 GLIS2 ZNF366 ATF7 ENSG00000235538 LOC105378104 GC06P163841
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC06P163841 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC06P163841 Gene

Chromosome:
6
Start:
163,840,560 bp from pter
End:
163,840,850 bp from pter
Size:
291 bases
Orientation:
Plus strand

Genomic View for GC06P163841 Gene

Genes around GC06P163841 on UCSC Golden Path with GeneCards custom track

GC06P163841 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC06P163841 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC06P163841 Gene

Proteins for GC06P163841 Gene

Post-translational modifications for GC06P163841 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC06P163841 Gene

Domains & Families for GC06P163841 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC06P163841 Gene

Function for GC06P163841 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC06P163841 Gene

Localization for GC06P163841 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC06P163841 Gene

Pathways & Interactions for GC06P163841 Gene

SuperPathways for GC06P163841 Gene

No Data Available

Interacting Proteins for GC06P163841 Gene

Gene Ontology (GO) - Biological Process for GC06P163841 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC06P163841 Gene

Drugs & Compounds for GC06P163841 Gene

No Compound Related Data Available

Transcripts for GC06P163841 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC06P163841 Gene

No ASD Table

Relevant External Links for GC06P163841 Gene

GeneLoc Exon Structure for
GC06P163841

No data available for mRNA/cDNA for GC06P163841 Gene

Expression for GC06P163841 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC06P163841 Gene

Orthologs for GC06P163841 Gene

No data available for Orthologs and Evolution for GC06P163841 Gene

Paralogs for GC06P163841 Gene

No data available for Paralogs for GC06P163841 Gene

Variants for GC06P163841 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC06P163841 Gene

Disorders for GC06P163841 Gene

No disorders were found for GC06P163841 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC06P163841 Gene

Publications for GC06P163841 Gene

  1. SRPDB: Signal Recognition Particle Database. (PMID: 12520023) Rosenblad MA … Samuelsson T (Nucleic acids research 2003) 1
  2. Prediction of signal recognition particle RNA genes. (PMID: 12140321) Regalia M … Samuelsson T (Nucleic acids research 2002) 1
  3. Towards the structure of the mammalian signal recognition particle. (PMID: 11839493) Wild K … Cusack S (Current opinion in structural biology 2002) 1
  4. Structural and energetic analysis of RNA recognition by a universally conserved protein from the signal recognition particle. (PMID: 11243816) Batey RT … Doudna JA (Journal of molecular biology 2001) 1
  5. Crystal structure of the ribonucleoprotein core of the signal recognition particle. (PMID: 10678824) Batey RT … Doudna JA (Science (New York, N.Y.) 2000) 1

Products for GC06P163841 Gene

Sources for GC06P163841 Gene

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