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Aliases for GC06P157399 Gene

Subcategory (RNA class) for GC06P157399 Gene

lncRNA

Quality Score for this RNA gene is

6

Aliases for GC06P157399 Gene

No Aliases found

No data available for External Ids for GC06P157399 Gene

Summaries for GC06P157399 Gene

GeneCards Summary for GC06P157399 Gene

GC06P157399 is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for GC06P157399 Gene

  • ncRNA: An RNA transcript that does not encode for a protein rather the RNA molecule is the gene product.

View fRNAdb secondary structures for GC06P157399

Additional gene information for GC06P157399 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC06P157399 Gene

Genomics for GC06P157399 Gene

Regulatory Elements for GC06P157399 Gene

Enhancers for GC06P157399 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06H157392 1.2 Ensembl ENCODE 0.4 -5.4 -5355 2 HDGF ATF1 TCF12 ZNF766 CBX5 GATA2 ATF7 NCOA1 SMARCB1 ZNF592 TMEM242 SYNJ2 GC06P157400 GC06P157399 ZDHHC14
GH06H157379 1.1 ENCODE 0.4 -17.9 -17922 3 HDGF MLX ARNT ZFP64 ARID4B SIN3A FEZF1 ZNF2 SLC30A9 ZNF766 LOC100420839 LOC105378078 SYNJ2-IT1 LOC105378073 ARID1B ENSG00000234361 ZDHHC14 GC06P157400 GC06P157399
GH06H157434 1.2 Ensembl ENCODE 0.3 +35.8 35750 1 ELF3 PKNOX1 FOXA2 ARID4B THRB ZSCAN9 RAD21 RARA YY1 TCF12 GC06P157399 GC06P157400 MIR3692
GH06H157428 1.1 Ensembl ENCODE 0.3 +29.8 29788 0 PKNOX1 ARNT EGR1 FOS CREM ZBTB2 REST ZEB2 ZNF217 MTA1 GC06P157399 GC06P157400 MIR3692
GH06H157460 1.6 FANTOM5 Ensembl ENCODE 0.2 +62.4 62423 2 HDGF PKNOX1 FOXA2 ATF1 YBX1 TCF12 ZNF121 ZNF766 CBX5 GATA2 ZDHHC14 SNX9 GC06P157399 GC06P157400 MIR3692
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC06P157399 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC06P157399 Gene

Chromosome:
6
Start:
157,399,157 bp from pter
End:
157,399,418 bp from pter
Size:
262 bases
Orientation:
Plus strand

Genomic View for GC06P157399 Gene

Genes around GC06P157399 on UCSC Golden Path with GeneCards custom track

GC06P157399 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC06P157399 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC06P157399 Gene

ORGUL Member Location for GC06P157399 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC06P157399 Gene

Proteins for GC06P157399 Gene

Post-translational modifications for GC06P157399 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC06P157399 Gene

Domains & Families for GC06P157399 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC06P157399 Gene

Function for GC06P157399 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC06P157399 Gene

Localization for GC06P157399 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC06P157399 Gene

Pathways & Interactions for GC06P157399 Gene

SuperPathways for GC06P157399 Gene

No Data Available

Interacting Proteins for GC06P157399 Gene

Gene Ontology (GO) - Biological Process for GC06P157399 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC06P157399 Gene

Drugs & Compounds for GC06P157399 Gene

No Compound Related Data Available

Transcripts for GC06P157399 Gene

fRNAdb Secondary structures for GC06P157399 Gene

  • FR185740

Alternative Splicing Database (ASD) splice patterns (SP) for GC06P157399 Gene

No ASD Table

Relevant External Links for GC06P157399 Gene

GeneLoc Exon Structure for
GC06P157399

No data available for mRNA/cDNA for GC06P157399 Gene

Expression for GC06P157399 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC06P157399 Gene

Orthologs for GC06P157399 Gene

No data available for Orthologs and Evolution for GC06P157399 Gene

Paralogs for GC06P157399 Gene

No data available for Paralogs for GC06P157399 Gene

Variants for GC06P157399 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC06P157399 Gene

Disorders for GC06P157399 Gene

No disorders were found for GC06P157399 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC06P157399 Gene

Publications for GC06P157399 Gene

  1. The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts. (PMID: 18089548) Genome Information Integration Project And H-Invitational 2 … Gojobori T (Nucleic acids research 2008) 1
  2. Integrative annotation of 21,037 human genes validated by full-length cDNA clones. (PMID: 15103394) Imanishi T … Sugano S (PLoS biology 2004) 1

Products for GC06P157399 Gene

Sources for GC06P157399 Gene

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