Aliases for GC06P131821 Gene
Subcategory (RNA class) for GC06P131821 Gene
Quality Score for this RNA gene is
Aliases for GC06P131821 Gene
No data available for External Ids for GC06P131821 Gene
Summaries for GC06P131821 Gene
GeneCards Summary for GC06P131821 Gene
GC06P131821 is an RNA Gene, and is affiliated with the 7SK RNA class.
fRNAdb sequence ontologies for GC06P131821 Gene - the ORGUL cluster for this gene includes several descriptions:
-
snRNA: A small nuclear RNA molecule involved in pre-mRNA splicing and processing.
-
7SK RNA: 7SK was discovered as an abundant small nuclear RNA in the mid-70s but a possible function has only recently been suggested [1]. Two independent studies have found that 7SK RNA binds the CDK9/cyclin T complex (known as elongation factor P-TEFb). P-TEFb activates transcription by phosphorylating the C-terminal domain of RNA polymerase II. This process is negatively regulated by the 7SK RNP. The secondary structure of 7SK RNA shown here was proposed by Wasserman and Steitz on the basis of chemical modification and enzymatic cleavage experiments [2]. This family contains a number of annotated pseudogenes and 7SK derived repeats. The threshold is artificially high to minimise the pseudogene count.
Additional gene information for GC06P131821 Gene
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC06P131821 Gene
Genomics for GC06P131821 Gene
GeneHancer (GH) Regulatory Elements for GC06P131821 Gene
GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
---|---|---|---|---|---|---|---|---|---|---|
GH06I131819 | Enhancer | 0.6 | ENCODE | 550.8 | -0.3 | -259 | 1.1 | PKNOX1 RFX1 ZNF189 TEAD4 TAL1 CBFA2T3 REST ATF2 ZNF7 CTBP1 | GC06P131821 SELENOKP2 RN7SKP245 GC06M131821 LOC100421775 ENPP1 |
Regulatory Element Products
Genomic Locations for GC06P131821 Gene
- chr6:131,820,333-131,820,653
- (GRCh38/hg38)
- Size:
- 321 bases
- Orientation:
- Plus strand
Genomic View for GC06P131821 Gene


ORGUL Member Location for GC06P131821 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC06P131821 Gene
Proteins for GC06P131821 Gene
Post-translational modifications for GC06P131821 Gene
Antibody Products
- Search GeneTex for Antibodies for GC06P131821
Protein Products
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No data available for DME Specific Peptides for GC06P131821 Gene
Domains & Families for GC06P131821 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC06P131821 Gene
Function for GC06P131821 Gene
Animal Model Products
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-
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CRISPR Products
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miRNA for GC06P131821 Gene
- miRTarBase miRNAs that target GC06P131821
miRNA Products
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Inhibitory RNA Products
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Clone Products
- GenScript: Custom all cDNA clones Services for GC06P131821
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VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for GC06P131821 Gene
Localization for GC06P131821 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC06P131821 Gene
Transcripts for GC06P131821 Gene
CRISPR Products
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miRNA Products
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Inhibitory RNA Products
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Clone Products
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- VectorBuilder custom plasmid, inducible vectors for GC06P131821
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for GC06P131821
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Relevant External Links for GC06P131821 Gene
- GeneLoc Exon Structure for
- GC06P131821
No data available for mRNA/cDNA for GC06P131821 Gene
Expression for GC06P131821 Gene
Primer Products
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC06P131821 Gene
Orthologs for GC06P131821 Gene
No data available for Orthologs and Evolution for GC06P131821 Gene
Paralogs for GC06P131821 Gene
No data available for Paralogs for GC06P131821 Gene
Variants for GC06P131821 Gene
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC06P131821 Gene
Disorders for GC06P131821 Gene
No disorders were found for GC06P131821 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC06P131821 Gene
Publications for GC06P131821 Gene
- Transcription: surprising role for an elusive small nuclear RNA. (PMID: 11864590) Blencowe BJ (Current biology : CB 2002) 1
- Structural analyses of the 7SK ribonucleoprotein (RNP), the most abundant human small RNP of unknown function. (PMID: 1646389) Wassarman DA … Steitz JA (Molecular and cellular biology 1991) 1
Products for GC06P131821 Gene
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- VectorBuilder custom plasmid, inducible vectors for GC06P131821
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for GC06P131821
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Search GeneTex for Antibodies for GC06P131821
- Search GeneTex for Proteins for GC06P131821
Sources for GC06P131821 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
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- (18) KEGG
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- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
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- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
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- (107) ProteomicsDB
- (108) SCBT
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- (114) diseasecard
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- (147) Gene ORGANizer
- (148) abm
- (149) CrownBio
- (150) Human Protein Atlas
- (151) GWAS Catalog
- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew