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Aliases for GC06P119628 Gene

Subcategory (RNA class) for GC06P119628 Gene


Quality Score for this RNA gene is


Aliases for GC06P119628 Gene

No Aliases found

ORGUL Members for GC06P119628 Gene

No data available for External Ids for GC06P119628 Gene

Summaries for GC06P119628 Gene

GeneCards Summary for GC06P119628 Gene

GC06P119628 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC06P119628 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC06P119628

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC06P119628 Gene

Genomics for GC06P119628 Gene

Regulatory Elements for GC06P119628 Gene

Enhancers for GC06P119628 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06G119626 1.5 Ensembl ENCODE dbSUPER 0.7 -0.7 -667 2.6 PKNOX1 ATF1 ARNT TCF12 ZNF766 ELK1 GATA2 CAVIN1 NCOA1 REST MAN1A1 GC06P119628 LOC285762
GH06G119620 1.1 Ensembl ENCODE dbSUPER 0.4 -7.5 -7484 1.7 CTCF FOSL1 JUND FOS ZBTB33 CHAMP1 MAN1A1 GC06P119628 LOC285762
GH06G119611 0.7 dbSUPER 0.4 -15.4 -15444 3.4 CTCF HLF CEBPB ZNF507 OSR2 ZFHX2 RAD51 GLIS1 ZNF580 TRIM28 MAN1A1 GC06P119628 LOC285762
GH06G119601 0.9 ENCODE dbSUPER 0.3 -25.9 -25910 1.8 ATF2 JUND ZNF316 ZFHX2 FOS MAFK EMSY EGR2 MAN1A1 GC06P119628 LOC285762
GH06G119540 1 ENCODE 0.2 -87.4 -87387 2.1 ATF1 ARNT SIN3A TCF12 ZNF766 ELK1 GATA2 FOS NCOA1 REST LOC285762 GC06P119628
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC06P119628 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC06P119628 Gene

119,628,763 bp from pter
119,628,962 bp from pter
200 bases
Plus strand

Genomic View for GC06P119628 Gene

Genes around GC06P119628 on UCSC Golden Path with GeneCards custom track

GC06P119628 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC06P119628 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC06P119628 Gene

ORGUL Member Location for GC06P119628 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC06P119628 Gene

Proteins for GC06P119628 Gene

Post-translational modifications for GC06P119628 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC06P119628 Gene

Domains & Families for GC06P119628 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC06P119628 Gene

Function for GC06P119628 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC06P119628 Gene

Localization for GC06P119628 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC06P119628 Gene

Pathways & Interactions for GC06P119628 Gene

SuperPathways for GC06P119628 Gene

No Data Available

Interacting Proteins for GC06P119628 Gene

Gene Ontology (GO) - Biological Process for GC06P119628 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC06P119628 Gene

Drugs & Compounds for GC06P119628 Gene

No Compound Related Data Available

Transcripts for GC06P119628 Gene

fRNAdb Secondary structures for GC06P119628 Gene

  • FR095542
  • FR372650

Alternative Splicing Database (ASD) splice patterns (SP) for GC06P119628 Gene

No ASD Table

Relevant External Links for GC06P119628 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC06P119628 Gene

Expression for GC06P119628 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC06P119628 Gene

Orthologs for GC06P119628 Gene

No data available for Orthologs and Evolution for GC06P119628 Gene

Paralogs for GC06P119628 Gene

No data available for Paralogs for GC06P119628 Gene

Variants for GC06P119628 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC06P119628 Gene

Disorders for GC06P119628 Gene

No disorders were found for GC06P119628 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC06P119628 Gene

Publications for GC06P119628 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen J.S. … Haussler D. (PLoS Comput. Biol. 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S. … Stadler P.F. (Nat. Biotechnol. 2005) 1

Products for GC06P119628 Gene

Sources for GC06P119628 Gene

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