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Aliases for GC06P110895 Gene

Subcategory (RNA class) for GC06P110895 Gene

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Quality Score for this RNA gene is

0.4

Aliases for GC06P110895 Gene

No Aliases found

ORGUL Members for GC06P110895 Gene

No data available for External Ids for GC06P110895 Gene

Summaries for GC06P110895 Gene

GeneCards Summary for GC06P110895 Gene

GC06P110895 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC06P110895 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC06P110895

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC06P110895 Gene

Genomics for GC06P110895 Gene

Regulatory Elements for GC06P110895 Gene

Enhancers for GC06P110895 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06G110873 1.8 FANTOM5 ENCODE dbSUPER 0.4 -18.6 -18577 6.6 CREB3L1 AGO1 ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 RPF2 CDK19 FCF1P5 GTF3C6 RNU6-957P MFSD4B AMD1 SLC16A10 ENSG00000271607 GC06P110895
GH06G110891 0.6 dbSUPER 0.7 -3.6 -3607 0.7 ZNF316 MAFG NR2F6 NFE2 EMSY MAFK GTF3C6 CDK19 RNU6-957P RPF2 GC06P110895 ENSG00000271607
GH06G110884 1 Ensembl dbSUPER 0.4 -10.0 -10032 2.2 ESRRA BACH1 ZNF664 ZFHX2 ZNF316 NR2F6 NFE2 MAFK NFE2L2 EGR2 RPF2 CDK19 GTF3C6 RNU6-957P GC06P110895 ENSG00000271607
GH06G110866 1.3 Ensembl ENCODE dbSUPER 0.3 -28.2 -28201 1.5 ARID4B RAD21 YY1 ELK1 IKZF2 THAP11 ZNF362 ZBTB11 CEBPB ZNF592 CDK19 CNN2P9 ENSG00000271607 GC06P110895
GH06G110888 0.6 dbSUPER 0.4 -5.9 -5890 1.0 CTCF ZNF654 TRIM22 REST ZNF2 RAD21 ZNF664 SMC3 ZNF24 CDK19 GTF3C6 RNU6-957P RPF2 AMD1 GC06P110895 ENSG00000271607
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC06P110895 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC06P110895 Gene

Chromosome:
6
Start:
110,895,132 bp from pter
End:
110,895,247 bp from pter
Size:
116 bases
Orientation:
Plus strand

Genomic View for GC06P110895 Gene

Genes around GC06P110895 on UCSC Golden Path with GeneCards custom track

GC06P110895 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC06P110895 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC06P110895 Gene

ORGUL Member Location for GC06P110895 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC06P110895 Gene

Proteins for GC06P110895 Gene

Post-translational modifications for GC06P110895 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC06P110895 Gene

Domains & Families for GC06P110895 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC06P110895 Gene

Function for GC06P110895 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC06P110895 Gene

Localization for GC06P110895 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC06P110895 Gene

Pathways & Interactions for GC06P110895 Gene

SuperPathways for GC06P110895 Gene

No Data Available

Interacting Proteins for GC06P110895 Gene

Gene Ontology (GO) - Biological Process for GC06P110895 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC06P110895 Gene

Drugs & Compounds for GC06P110895 Gene

No Compound Related Data Available

Transcripts for GC06P110895 Gene

fRNAdb Secondary structures for GC06P110895 Gene

  • FR285785
  • FR167196

Alternative Splicing Database (ASD) splice patterns (SP) for GC06P110895 Gene

No ASD Table

Relevant External Links for GC06P110895 Gene

GeneLoc Exon Structure for
GC06P110895

No data available for mRNA/cDNA for GC06P110895 Gene

Expression for GC06P110895 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC06P110895 Gene

Orthologs for GC06P110895 Gene

No data available for Orthologs and Evolution for GC06P110895 Gene

Paralogs for GC06P110895 Gene

No data available for Paralogs for GC06P110895 Gene

Variants for GC06P110895 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC06P110895 Gene

Disorders for GC06P110895 Gene

No disorders were found for GC06P110895 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC06P110895 Gene

Publications for GC06P110895 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen J.S. … Haussler D. (PLoS Comput. Biol. 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S. … Stadler P.F. (Nat. Biotechnol. 2005) 1

Products for GC06P110895 Gene

Sources for GC06P110895 Gene

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