Free for academic non-profit institutions. Other users need a Commercial license

Aliases for GC06P109306 Gene

Subcategory (RNA class) for GC06P109306 Gene

Y RNA

Quality Score for this RNA gene is

2

Aliases for GC06P109306 Gene

No Aliases found

ORGUL Members for GC06P109306 Gene

No data available for External Ids for GC06P109306 Gene

Summaries for GC06P109306 Gene

GeneCards Summary for GC06P109306 Gene

GC06P109306 is an RNA Gene, and is affiliated with the Y RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC06P109306 Gene

Genomics for GC06P109306 Gene

Regulatory Elements for GC06P109306 Gene

Enhancers for GC06P109306 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06G109303 1.6 Ensembl ENCODE dbSUPER 0.7 -1.0 -960 3.0 PKNOX1 FOXA2 CREB3L1 ARNT ZNF766 JUNB REST ZNF592 MEF2D SMARCA4 CD164 CCDC162P SMPD2 GC06P109306 PTCHD3P3
GH06G109299 1.2 Ensembl ENCODE dbSUPER 0.7 -4.5 -4452 3.4 PKNOX1 RFX1 RNF2 GTF2E2 ETV1 ZBTB11 ZBTB7A MEF2D PBX2 IKZF1 CCDC162P CD164 GC06P109306 PTCHD3P3
GH06G109295 1.4 Ensembl ENCODE dbSUPER 0.4 -9.1 -9088 2.5 FOXA2 RAD21 THRB TCF12 CREM MIXL1 HMG20B CAVIN1 HDAC8 KAT8 CCDC162P CD164 SMPD2 PTCHD3P3 GC06P109306
GH06G109297 1.1 Ensembl ENCODE dbSUPER 0.4 -7.4 -7393 0.6 TFDP1 GATAD2A LEF1 MLX TCF7 BCL6 CCDC162P CD164 GC06P109306 PTCHD3P3
GH06G109300 1 Ensembl ENCODE dbSUPER 0.4 -6.3 -6349 0.3 GTF2E2 CEBPB MGA CD164 PTCHD3P3 GC06P109306
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC06P109306 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC06P109306 Gene

Chromosome:
6
Start:
109,305,493 bp from pter
End:
109,305,593 bp from pter
Size:
101 bases
Orientation:
Plus strand

Genomic View for GC06P109306 Gene

Genes around GC06P109306 on UCSC Golden Path with GeneCards custom track

GC06P109306 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC06P109306 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC06P109306 Gene

Proteins for GC06P109306 Gene

Post-translational modifications for GC06P109306 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC06P109306 Gene

Domains & Families for GC06P109306 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC06P109306 Gene

Function for GC06P109306 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC06P109306 Gene

Localization for GC06P109306 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC06P109306 Gene

Pathways & Interactions for GC06P109306 Gene

SuperPathways for GC06P109306 Gene

No Data Available

Interacting Proteins for GC06P109306 Gene

Gene Ontology (GO) - Biological Process for GC06P109306 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC06P109306 Gene

Drugs & Compounds for GC06P109306 Gene

No Compound Related Data Available

Transcripts for GC06P109306 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC06P109306 Gene

No ASD Table

Relevant External Links for GC06P109306 Gene

GeneLoc Exon Structure for
GC06P109306

No data available for mRNA/cDNA for GC06P109306 Gene

Expression for GC06P109306 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC06P109306 Gene

Orthologs for GC06P109306 Gene

No data available for Orthologs and Evolution for GC06P109306 Gene

Paralogs for GC06P109306 Gene

No data available for Paralogs for GC06P109306 Gene

Variants for GC06P109306 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC06P109306 Gene

Disorders for GC06P109306 Gene

No disorders were found for GC06P109306 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC06P109306 Gene

Publications for GC06P109306 Gene

  1. Conserved features of Y RNAs: a comparison of experimentally derived secondary structures. (PMID: 10606662) Teunissen S.W. … Pruijn G.J. (Nucleic Acids Res. 2000) 1
  2. Ro ribonucleoproteins contribute to the resistance of Deinococcus radiodurans to ultraviolet irradiation. (PMID: 10766734) Chen X. … Wolin S.L. (Genes Dev. 2000) 1
  3. Caenorhabditis elegans embryos contain only one major species of Ro RNP. (PMID: 7489501) Van Horn D.J. … Wolin S.L. (RNA 1995) 1

Products for GC06P109306 Gene

Sources for GC06P109306 Gene

Content
Loading form....