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Aliases for GC06P106787 Gene

Subcategory (RNA class) for GC06P106787 Gene

miRNA

Quality Score for this RNA gene is

0

Aliases for GC06P106787 Gene

No Aliases found

ORGUL Members for GC06P106787 Gene

No data available for External Ids for GC06P106787 Gene

Summaries for GC06P106787 Gene

GeneCards Summary for GC06P106787 Gene

GC06P106787 is an RNA Gene, and is affiliated with the miRNA class.

fRNAdb sequence ontologies for GC06P106787 Gene

  • pre_miRNA: The 60-70 nucleotide region remain after Drosha processing of the primary transcript, that folds back upon itself to form a hairpin sructure.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC06P106787 Gene

Genomics for GC06P106787 Gene

Regulatory Elements for GC06P106787 Gene

Enhancers for GC06P106787 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06G106781 1.4 FANTOM5 ENCODE dbSUPER 0.7 -1.0 -977 3.6 SOX13 ESRRA NFIB JUN SIN3A MAX RAD21 YY1 FOSL1 CTBP1 QRSL1 GC06P106787 RNU6-117P
GH06G106771 1.3 VISTA ENCODE dbSUPER 0.4 -10.8 -10752 3.1 MAX EBF1 RAD21 YY1 CTBP1 GATA3 NFYB HNF4G FOS RFX1 LOC100422737 GC06P106787 RNU6-117P
GH06G106780 0.7 dbSUPER 0.7 -3.3 -3271 0.7 PKNOX1 ZNF621 TSHZ1 FOXA1 PRDM6 GATA3 ZNF366 ZNF585B ZSCAN5C PBX2 GC06P106787 RNU6-117P
GH06G106764 1.1 ENCODE dbSUPER 0.4 -18.5 -18529 2.4 HDAC1 FOXA2 RAD21 YY1 ZNF121 IKZF1 HNF4A FOXJ2 MYC SP7 LOC100422737 RNU6-117P GC06P106787
GH06G106744 1.4 Ensembl ENCODE dbSUPER 0.3 -38.1 -38050 4.0 TBP FOXA2 PKNOX1 SIN3A BRCA1 RAD21 RFX5 SMARCC2 RCOR1 FOS MIR587 LOC100422737 QRSL1 RNU6-117P GC06P106787
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC06P106787 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC06P106787 Gene

Chromosome:
6
Start:
106,784,124 bp from pter
End:
106,784,220 bp from pter
Size:
97 bases
Orientation:
Plus strand

Genomic View for GC06P106787 Gene

Genes around GC06P106787 on UCSC Golden Path with GeneCards custom track

GC06P106787 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC06P106787 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC06P106787 Gene

Proteins for GC06P106787 Gene

Post-translational modifications for GC06P106787 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC06P106787 Gene

Domains & Families for GC06P106787 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC06P106787 Gene

Function for GC06P106787 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC06P106787 Gene

Localization for GC06P106787 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC06P106787 Gene

Pathways & Interactions for GC06P106787 Gene

SuperPathways for GC06P106787 Gene

No Data Available

Interacting Proteins for GC06P106787 Gene

Gene Ontology (GO) - Biological Process for GC06P106787 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC06P106787 Gene

Drugs & Compounds for GC06P106787 Gene

No Compound Related Data Available

Transcripts for GC06P106787 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC06P106787 Gene

No ASD Table

Relevant External Links for GC06P106787 Gene

GeneLoc Exon Structure for
GC06P106787

No data available for mRNA/cDNA for GC06P106787 Gene

Expression for GC06P106787 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC06P106787 Gene

Orthologs for GC06P106787 Gene

No data available for Orthologs and Evolution for GC06P106787 Gene

Paralogs for GC06P106787 Gene

No data available for Paralogs for GC06P106787 Gene

Variants for GC06P106787 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC06P106787 Gene

Disorders for GC06P106787 Gene

No disorders were found for GC06P106787 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC06P106787 Gene

Publications for GC06P106787 Gene

  1. The colorectal microRNAome. (PMID: 16505370) Cummins J.M. … Velculescu V.E. (Proc. Natl. Acad. Sci. U.S.A. 2006) 1

Products for GC06P106787 Gene

Sources for GC06P106787 Gene

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