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Aliases for GC06P106421 Gene

Subcategory (RNA class) for GC06P106421 Gene

Y RNA

Quality Score for this RNA gene is

2

Aliases for GC06P106421 Gene

No Aliases found

ORGUL Members for GC06P106421 Gene

No data available for External Ids for GC06P106421 Gene

Summaries for GC06P106421 Gene

GeneCards Summary for GC06P106421 Gene

GC06P106421 is an RNA Gene, and is affiliated with the Y RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC06P106421 Gene

Genomics for GC06P106421 Gene

Regulatory Elements for GC06P106421 Gene

Enhancers for GC06P106421 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06G106410 0.9 ENCODE 0.4 -8.9 -8886 1.8 ATF1 PKNOX1 NFRKB TCF12 EGR1 FOS CREM ZBTB2 USF2 ELF4 GC06P106421 CRYBG1
GH06G106379 1.2 ENCODE dbSUPER 0.3 -38.8 -38796 4.7 PKNOX1 TCF12 ZNF766 GATA2 CAVIN1 NCOA1 REST ZNF623 ZNF592 MEF2D CRYBG1 ENSG00000233941 GC06P106421
GH06G106360 1.2 ENCODE dbSUPER 0.2 -59.8 -59763 1.2 SIN3A ZNF2 GLIS2 GATA2 ZNF143 KLF13 SP3 YY2 ZHX2 REST CRYBG1 GC06P106421
GH06G106377 0.8 Ensembl dbSUPER 0.3 -43.3 -43342 0.4 L3MBTL2 SPI1 MGA ZNF592 CRYBG1 GC06P106421
GH06G106368 1.1 ENCODE dbSUPER 0.2 -49.4 -49382 5.0 HDAC1 PKNOX1 TCF12 ZNF766 GATA2 ELK1 ETV6 FOS EGR2 NCOA1 CRYBG1 GC06P106421
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC06P106421 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC06P106421 Gene

Chromosome:
6
Start:
106,420,705 bp from pter
End:
106,420,805 bp from pter
Size:
101 bases
Orientation:
Plus strand

Genomic View for GC06P106421 Gene

Genes around GC06P106421 on UCSC Golden Path with GeneCards custom track

GC06P106421 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC06P106421 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC06P106421 Gene

Proteins for GC06P106421 Gene

Post-translational modifications for GC06P106421 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC06P106421 Gene

Domains & Families for GC06P106421 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC06P106421 Gene

Function for GC06P106421 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC06P106421 Gene

Localization for GC06P106421 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC06P106421 Gene

Pathways & Interactions for GC06P106421 Gene

SuperPathways for GC06P106421 Gene

No Data Available

Interacting Proteins for GC06P106421 Gene

Gene Ontology (GO) - Biological Process for GC06P106421 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC06P106421 Gene

Drugs & Compounds for GC06P106421 Gene

No Compound Related Data Available

Transcripts for GC06P106421 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC06P106421 Gene

No ASD Table

Relevant External Links for GC06P106421 Gene

GeneLoc Exon Structure for
GC06P106421

No data available for mRNA/cDNA for GC06P106421 Gene

Expression for GC06P106421 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC06P106421 Gene

Orthologs for GC06P106421 Gene

No data available for Orthologs and Evolution for GC06P106421 Gene

Paralogs for GC06P106421 Gene

No data available for Paralogs for GC06P106421 Gene

Variants for GC06P106421 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC06P106421 Gene

Disorders for GC06P106421 Gene

No disorders were found for GC06P106421 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC06P106421 Gene

Publications for GC06P106421 Gene

  1. Conserved features of Y RNAs: a comparison of experimentally derived secondary structures. (PMID: 10606662) Teunissen S.W. … Pruijn G.J. (Nucleic Acids Res. 2000) 1
  2. Ro ribonucleoproteins contribute to the resistance of Deinococcus radiodurans to ultraviolet irradiation. (PMID: 10766734) Chen X. … Wolin S.L. (Genes Dev. 2000) 1
  3. Caenorhabditis elegans embryos contain only one major species of Ro RNP. (PMID: 7489501) Van Horn D.J. … Wolin S.L. (RNA 1995) 1

Products for GC06P106421 Gene

Sources for GC06P106421 Gene

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