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Aliases for GC06P060463 Gene

Subcategory (RNA class) for GC06P060463 Gene

tRNA

Quality Score for this RNA gene is

2

Aliases for GC06P060463 Gene

No Aliases found

ORGUL Members for GC06P060463 Gene

No data available for External Ids for GC06P060463 Gene

Summaries for GC06P060463 Gene

GeneCards Summary for GC06P060463 Gene

GC06P060463 is an RNA Gene, and is affiliated with the tRNA class.

fRNAdb sequence ontologies for GC06P060463 Gene

  • tRNA: Transfer RNA (tRNA) molecules are approximately 80 nucleotides in length. Their secondary structure includes four short double-helical elements and three loops (D, anti-codon, and T loops). Further hydrogen bonds mediate the characteristic L-shaped molecular structure. tRNAs have two regions of fundamental functional importance: the anti-codon, which is responsible for specific mRNA codon recognition, and the 3' end, to which the tRNAs corresponding amino acid is attached (by aminoacyl-tRNA synthetases). tRNAs cope with the degeneracy of the genetic code in two manners: having more than one tRNA (with a specific anti-codon) for a particular amino acid; and 'wobble' base-pairing, i.e. permitting non-standard base-pairing at the 3rd anti-codon position.

View fRNAdb secondary structures for GC06P060463

Additional gene information for GC06P060463 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC06P060463 Gene

Genomics for GC06P060463 Gene

Regulatory Elements for GC06P060463 Gene

Enhancers for GC06P060463 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06H060444 0.4 ENCODE 0.4 -18.6 -18575 0 CTCF RAD21 GC06M060438 GC06P060463
GH06H060441 0.3 FANTOM5 0.3 -22.0 -21951 0 GC06M060438 GC06P060463
GH06H060511 0.3 FANTOM5 0.2 +48.1 48078 0 GC06M060545 GC06P060463
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC06P060463 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC06P060463 Gene

Chromosome:
6
Start:
60,463,293 bp from pter
End:
60,463,366 bp from pter
Size:
74 bases
Orientation:
Plus strand

Genomic View for GC06P060463 Gene

Genes around GC06P060463 on UCSC Golden Path with GeneCards custom track

GC06P060463 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC06P060463 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC06P060463 Gene

ORGUL Member Location for GC06P060463 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC06P060463 Gene

Proteins for GC06P060463 Gene

Post-translational modifications for GC06P060463 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC06P060463 Gene

Domains & Families for GC06P060463 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC06P060463 Gene

Function for GC06P060463 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC06P060463 Gene

Localization for GC06P060463 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC06P060463 Gene

Pathways & Interactions for GC06P060463 Gene

SuperPathways for GC06P060463 Gene

No Data Available

Interacting Proteins for GC06P060463 Gene

Gene Ontology (GO) - Biological Process for GC06P060463 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC06P060463 Gene

Drugs & Compounds for GC06P060463 Gene

No Compound Related Data Available

Transcripts for GC06P060463 Gene

fRNAdb Secondary structures for GC06P060463 Gene

  • FR214949

Alternative Splicing Database (ASD) splice patterns (SP) for GC06P060463 Gene

No ASD Table

Relevant External Links for GC06P060463 Gene

GeneLoc Exon Structure for
GC06P060463

No data available for mRNA/cDNA for GC06P060463 Gene

Expression for GC06P060463 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC06P060463 Gene

Orthologs for GC06P060463 Gene

No data available for Orthologs and Evolution for GC06P060463 Gene

Paralogs for GC06P060463 Gene

No data available for Paralogs for GC06P060463 Gene

Variants for GC06P060463 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC06P060463 Gene

Disorders for GC06P060463 Gene

No disorders were found for GC06P060463 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC06P060463 Gene

Publications for GC06P060463 Gene

  1. tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. (PMID: 9023104) Lowe TM … Eddy SR (Nucleic acids research 1997) 1
  2. The tertiary structure of tRNA and the development of the genetic code. (PMID: 8256282) Hou YM (Trends in biochemical sciences 1993) 1

Products for GC06P060463 Gene

Sources for GC06P060463 Gene

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