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Aliases for GC06P054848 Gene

Subcategory (RNA class) for GC06P054848 Gene

lncRNA

Quality Score for this RNA gene is

0

Aliases for GC06P054848 Gene

No Aliases found

ORGUL Members for GC06P054848 Gene

No data available for External Ids for GC06P054848 Gene

Summaries for GC06P054848 Gene

GeneCards Summary for GC06P054848 Gene

GC06P054848 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC06P054848 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC06P054848 Gene

Genomics for GC06P054848 Gene

Regulatory Elements for GC06P054848 Gene

Enhancers for GC06P054848 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06H054845 1.2 ENCODE dbSUPER 0.7 -0.7 -650 4 SIN3A GLIS2 FOS SP3 REST ZNF518A MAFF SMARCA4 GLIS1 WT1 ENSG00000224984 ENSG00000261116 FAM83B GC06P054848
GH06H054877 1.3 ENCODE dbSUPER 0.3 +30.3 30298 2 PKNOX1 ARNT FEZF1 GLI4 ZNF2 GLIS2 ZNF302 KLF7 RUNX3 JUNB ENSG00000224984 ENSG00000228231 FAM83B TINAG GC06P054848 ENSG00000261116
GH06H054891 1.1 Ensembl ENCODE dbSUPER 0.3 +44.0 44037 2 MAFF JUND FOS NFE2 MAFK NFE2L2 ENSG00000224984 FAM83B ENSG00000261116 GC06P054848
GH06H054873 1 ENCODE dbSUPER 0.3 +26.1 26080 3 PKNOX1 CEBPG ZBTB40 MTA3 CTBP1 GATA3 ZNF366 FOSL2 FOS SMARCE1 ENSG00000224984 FAM83B RNU6-1023P GC06P054848 ENSG00000261116
GH06H054860 0.7 ENCODE dbSUPER 0.4 +12.4 12389 0 JUND FOS GC06P054848 ENSG00000261116
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC06P054848 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC06P054848 Gene

Chromosome:
6
Start:
54,848,568 bp from pter
End:
54,850,796 bp from pter
Size:
2,229 bases
Orientation:
Plus strand

Genomic View for GC06P054848 Gene

Genes around GC06P054848 on UCSC Golden Path with GeneCards custom track

GC06P054848 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC06P054848 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC06P054848 Gene

Proteins for GC06P054848 Gene

Post-translational modifications for GC06P054848 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC06P054848 Gene

Domains & Families for GC06P054848 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC06P054848 Gene

Function for GC06P054848 Gene

Phenotypes From GWAS Catalog for GC06P054848 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC06P054848 Gene

Localization for GC06P054848 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC06P054848 Gene

Pathways & Interactions for GC06P054848 Gene

SuperPathways for GC06P054848 Gene

No Data Available

Interacting Proteins for GC06P054848 Gene

Gene Ontology (GO) - Biological Process for GC06P054848 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC06P054848 Gene

Drugs & Compounds for GC06P054848 Gene

No Compound Related Data Available

Transcripts for GC06P054848 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC06P054848 Gene

No ASD Table

Relevant External Links for GC06P054848 Gene

GeneLoc Exon Structure for
GC06P054848

No data available for mRNA/cDNA for GC06P054848 Gene

Expression for GC06P054848 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC06P054848 Gene

Orthologs for GC06P054848 Gene

No data available for Orthologs and Evolution for GC06P054848 Gene

Paralogs for GC06P054848 Gene

No data available for Paralogs for GC06P054848 Gene

Variants for GC06P054848 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC06P054848 Gene

Disorders for GC06P054848 Gene

No disorders were found for GC06P054848 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC06P054848 Gene

Publications for GC06P054848 Gene

No publications were found for GC06P054848 Gene.

Products for GC06P054848 Gene

Sources for GC06P054848 Gene

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