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Aliases for GC06P052308 Gene

Subcategory (RNA class) for GC06P052308 Gene

antisense

Quality Score for this RNA gene is

2

Aliases for GC06P052308 Gene

No Aliases found

ORGUL Members for GC06P052308 Gene

No data available for External Ids for GC06P052308 Gene

Summaries for GC06P052308 Gene

GeneCards Summary for GC06P052308 Gene

GC06P052308 is an RNA Gene, and is affiliated with the antisense RNA class.

fRNAdb sequence ontologies for GC06P052308 Gene

  • antisense_RNA: Antisense RNA is RNA that is transcribed from the coding, rather than the template, strand of DNA. It is therefore complementary to mRNA.

View fRNAdb secondary structures for GC06P052308

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC06P052308 Gene

Genomics for GC06P052308 Gene

Regulatory Elements for GC06P052308 Gene

Enhancers for GC06P052308 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06G052302 1.9 FANTOM5 Ensembl ENCODE dbSUPER 0.7 -2.4 -2371 5.9 PKNOX1 FOXA2 ARNT E2F7 DMAP1 ZNF48 TCF12 GATA2 CBX5 JUNB GC06P052308 MCM3
GH06G052295 1.4 Ensembl ENCODE dbSUPER 0.4 -11.2 -11220 2.3 HDGF ELF3 PKNOX1 RAD21 YY1 CBX5 ZNF207 RELB ETV6 IKZF2 EFHC1 SLC25A20P1 IL17F MCM3 GC06P052308
GH06G052286 1.5 Ensembl ENCODE dbSUPER 0.3 -21.0 -21036 0.8 PKNOX1 FOXA2 ARID4B DMAP1 YY1 GATA2 ZNF143 REST MIER2 PPARG PAQR8 EFHC1 MCM3 GC06P052308
GH06G052283 1.4 ENCODE dbSUPER 0.3 -23.3 -23287 3.6 HDGF PKNOX1 ARNT WRNIP1 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 LOC646517 PAQR8 EFHC1 MCM3 GC06P052308
GH06G052299 0.9 dbSUPER 0.4 -7.6 -7596 2.3 HDAC1 TBL1XR1 NFIB RAD21 TCF12 ZNF766 GATA2 SCRT2 CREM EGR2 GC06P052308 MCM3
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC06P052308 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC06P052308 Gene

Chromosome:
6
Start:
52,308,236 bp from pter
End:
52,308,684 bp from pter
Size:
449 bases
Orientation:
Plus strand

Genomic View for GC06P052308 Gene

Genes around GC06P052308 on UCSC Golden Path with GeneCards custom track

GC06P052308 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC06P052308 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC06P052308 Gene

ORGUL Member Location for GC06P052308 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC06P052308 Gene

Proteins for GC06P052308 Gene

Post-translational modifications for GC06P052308 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC06P052308 Gene

Domains & Families for GC06P052308 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC06P052308 Gene

Function for GC06P052308 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC06P052308 Gene

Localization for GC06P052308 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC06P052308 Gene

Pathways & Interactions for GC06P052308 Gene

SuperPathways for GC06P052308 Gene

No Data Available

Interacting Proteins for GC06P052308 Gene

Gene Ontology (GO) - Biological Process for GC06P052308 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC06P052308 Gene

Drugs & Compounds for GC06P052308 Gene

No Compound Related Data Available

Transcripts for GC06P052308 Gene

fRNAdb Secondary structures for GC06P052308 Gene

  • FR102684
  • FR050120

Alternative Splicing Database (ASD) splice patterns (SP) for GC06P052308 Gene

No ASD Table

Relevant External Links for GC06P052308 Gene

GeneLoc Exon Structure for
GC06P052308

No data available for mRNA/cDNA for GC06P052308 Gene

Expression for GC06P052308 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC06P052308 Gene

Orthologs for GC06P052308 Gene

No data available for Orthologs and Evolution for GC06P052308 Gene

Paralogs for GC06P052308 Gene

No data available for Paralogs for GC06P052308 Gene

Variants for GC06P052308 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC06P052308 Gene

Disorders for GC06P052308 Gene

No disorders were found for GC06P052308 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC06P052308 Gene

Publications for GC06P052308 Gene

  1. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1
  2. Identification of an endogenous RNA transcribed from the antisense strand of the HFE gene. (PMID: 11532995) ThAcniAc A.C. … Mosser J. (Hum. Mol. Genet. 2001) 1

Products for GC06P052308 Gene

Sources for GC06P052308 Gene

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