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Aliases for GC06P045577 Gene

Subcategory (RNA class) for GC06P045577 Gene


Quality Score for this RNA gene is


Aliases for GC06P045577 Gene

No Aliases found

ORGUL Members for GC06P045577 Gene

No data available for External Ids for GC06P045577 Gene

Summaries for GC06P045577 Gene

GeneCards Summary for GC06P045577 Gene

GC06P045577 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC06P045577 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC06P045577

Additional gene information for GC06P045577 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC06P045577 Gene

Genomics for GC06P045577 Gene

Regulatory Elements for GC06P045577 Gene

Enhancers for GC06P045577 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06H045589 1.4 FANTOM5 Ensembl ENCODE 0.4 +12.8 12832 3.1 PKNOX1 FEZF1 SALL2 ZFHX2 GATA3 POLR2A ZBTB48 ZSCAN5C FOS PRDM10 RUNX2-AS1 ENSG00000271857 GC06P045577 GC06P045772
GH06H045606 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +30.7 30684 3.3 TBP RAD21 RFX5 SCRT2 RCOR1 FOS DEK EGR2 SMARCC1 ZNF362 RUNX2-AS1 RUNX2 ENSG00000271857 GC06P045577 GC06P045772
GH06H045577 0.6 Ensembl ENCODE 0.7 +0.3 325 0.8 PRDM1 RUNX2-AS1 GC06P045577 GC06P045772
GH06H045613 1 Ensembl ENCODE dbSUPER 0.3 +36.3 36304 1.6 FOXA2 CEBPB FOXP2 FOS DPF2 ENSG00000271857 GC06P045577 GC06P045772
GH06H045649 1.3 FANTOM5 ENCODE dbSUPER 0.2 +73.3 73280 2.6 MAZ JUN MCM5 MAX EP300 JUND POLR2A ZNF512 FOS ENSG00000271857 RUNX2-AS1 RUNX2 GC06P045577 GC06P045772
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC06P045577 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC06P045577 Gene

Genomic Locations for GC06P045577 Gene
145 bases
Plus strand

Genomic View for GC06P045577 Gene

Genes around GC06P045577 on UCSC Golden Path with GeneCards custom track

GC06P045577 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC06P045577 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC06P045577 Gene

ORGUL Member Location for GC06P045577 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC06P045577 Gene

Proteins for GC06P045577 Gene

Post-translational modifications for GC06P045577 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC06P045577 Gene

Domains & Families for GC06P045577 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC06P045577 Gene

Function for GC06P045577 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC06P045577 Gene

Localization for GC06P045577 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC06P045577 Gene

Pathways & Interactions for GC06P045577 Gene

SuperPathways for GC06P045577 Gene

No Data Available

Interacting Proteins for GC06P045577 Gene

Gene Ontology (GO) - Biological Process for GC06P045577 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC06P045577 Gene

Drugs & Compounds for GC06P045577 Gene

No Compound Related Data Available

Transcripts for GC06P045577 Gene

fRNAdb Secondary structures for GC06P045577 Gene

  • FR157437
  • FR120985

Alternative Splicing Database (ASD) splice patterns (SP) for GC06P045577 Gene

No ASD Table

Relevant External Links for GC06P045577 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC06P045577 Gene

Expression for GC06P045577 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC06P045577 Gene

Orthologs for GC06P045577 Gene

No data available for Orthologs and Evolution for GC06P045577 Gene

Paralogs for GC06P045577 Gene

No data available for Paralogs for GC06P045577 Gene

Variants for GC06P045577 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC06P045577 Gene

Disorders for GC06P045577 Gene

No disorders were found for GC06P045577 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC06P045577 Gene

Publications for GC06P045577 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

Products for GC06P045577 Gene

Sources for GC06P045577 Gene

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