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Aliases for GC06P043011 Gene

Subcategory (RNA class) for GC06P043011 Gene

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Quality Score for this RNA gene is

0.4

Aliases for GC06P043011 Gene

No Aliases found

ORGUL Members for GC06P043011 Gene

No data available for External Ids for GC06P043011 Gene

Summaries for GC06P043011 Gene

GeneCards Summary for GC06P043011 Gene

GC06P043011 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC06P043011 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC06P043011

Additional gene information for GC06P043011 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC06P043011 Gene

Genomics for GC06P043011 Gene

Regulatory Elements for GC06P043011 Gene

Enhancers for GC06P043011 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06H043009 0.6 ENCODE 0.7 -2.1 -2085 0 CTCF ZNF654 SOX6 ZNF10 ARID4B REST RAD21 ZSCAN21 POLR2A SMC3 GC06P043011 PPP2R5D
GH06H042983 1 ENCODE 0.3 -26.8 -26783 1 HDGF ATF1 ARID4B SIN3A DMAP1 YY1 SLC30A9 GLIS2 ZNF143 FOS RRP36 POLH GTPBP2 PPP2R5D GC06P043011
GH06H042987 0.8 ENCODE 0.3 -22.4 -22406 3 HDAC1 HDGF ZMYM3 CEBPG ZFHX2 FOXK2 EGR1 ATF7 EGR2 L3MBTL2 PEX6 CUL7 DNPH1 ENSG00000272223 PPP2R5D GC06P043011
GH06H042995 0.5 ENCODE 0.4 -14.9 -14909 1 CTCF CEBPG ZBTB33 CUL7 PPP2R5D GC06P043011
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC06P043011 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC06P043011 Gene

Chromosome:
6
Start:
43,011,402 bp from pter
End:
43,011,596 bp from pter
Size:
195 bases
Orientation:
Plus strand

Genomic View for GC06P043011 Gene

Genes around GC06P043011 on UCSC Golden Path with GeneCards custom track

GC06P043011 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC06P043011 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC06P043011 Gene

ORGUL Member Location for GC06P043011 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC06P043011 Gene

Proteins for GC06P043011 Gene

Post-translational modifications for GC06P043011 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC06P043011 Gene

Domains & Families for GC06P043011 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC06P043011 Gene

Function for GC06P043011 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC06P043011 Gene

Localization for GC06P043011 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC06P043011 Gene

Pathways & Interactions for GC06P043011 Gene

SuperPathways for GC06P043011 Gene

No Data Available

Interacting Proteins for GC06P043011 Gene

Gene Ontology (GO) - Biological Process for GC06P043011 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC06P043011 Gene

Drugs & Compounds for GC06P043011 Gene

No Compound Related Data Available

Transcripts for GC06P043011 Gene

fRNAdb Secondary structures for GC06P043011 Gene

  • FR001638

Alternative Splicing Database (ASD) splice patterns (SP) for GC06P043011 Gene

No ASD Table

Relevant External Links for GC06P043011 Gene

GeneLoc Exon Structure for
GC06P043011

No data available for mRNA/cDNA for GC06P043011 Gene

Expression for GC06P043011 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC06P043011 Gene

Orthologs for GC06P043011 Gene

No data available for Orthologs and Evolution for GC06P043011 Gene

Paralogs for GC06P043011 Gene

No data available for Paralogs for GC06P043011 Gene

Variants for GC06P043011 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC06P043011 Gene

Disorders for GC06P043011 Gene

No disorders were found for GC06P043011 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC06P043011 Gene

Publications for GC06P043011 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

Products for GC06P043011 Gene

Sources for GC06P043011 Gene

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