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Aliases for GC06P042135 Gene

Subcategory (RNA class) for GC06P042135 Gene

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Quality Score for this RNA gene is

0.2

Aliases for GC06P042135 Gene

No Aliases found

ORGUL Members for GC06P042135 Gene

No data available for External Ids for GC06P042135 Gene

Summaries for GC06P042135 Gene

GeneCards Summary for GC06P042135 Gene

GC06P042135 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC06P042135 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC06P042135

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC06P042135 Gene

Genomics for GC06P042135 Gene

Regulatory Elements for GC06P042135 Gene

Enhancers for GC06P042135 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06G042135 1.6 Ensembl ENCODE dbSUPER 0.7 +3.7 3737 8.8 HDGF FOXA2 PKNOX1 CREB3L1 ARNT ZFP64 ARID4B FEZF1 ZNF2 YY1 GUCA1B RRP36 ENSG00000261068 C6orf132 GC06P042135
GH06G042131 1.4 Ensembl ENCODE dbSUPER 0.7 -3.9 -3906 1.0 HDGF ELF3 MLX NFRKB ARID4B ZNF48 RAD21 RARA SLC30A9 EGR1 ENSG00000214732 GUCA1A GC06P042135 ENSG00000261068
GH06G042132 1 dbSUPER 0.7 -2.0 -2046 1.7 HDGF FOXA2 PKNOX1 ZNF48 FOS SP5 REST PPARG ZNF592 NFIL3 GUCA1A ENSG00000214732 GNMT GC06P042135 ENSG00000261068
GH06G042115 1.6 Ensembl ENCODE dbSUPER 0.4 -14.9 -14874 10.1 HDGF FOXA2 PKNOX1 CREB3L1 ARNT ARID4B SIN3A DMAP1 YY1 ZNF207 C6orf132 GUCA1A ENSG00000214732 GUCA1B MED20 ENSG00000207371 BYSL ENSG00000206977 ENSG00000261068 GC06P042135
GH06G042097 1.6 Ensembl ENCODE dbSUPER 0.3 -32.8 -32824 11.2 HNRNPUL1 HDGF PKNOX1 MLX CREB3L1 ARID4B SIN3A SLC30A9 ZNF766 ZNF143 C6orf132 GUCA1A ENSG00000214732 GUCA1B ENSG00000261068 FRS3 PRICKLE4 ENSG00000124593 MED20 ENSG00000207371
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC06P042135 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC06P042135 Gene

Chromosome:
6
Start:
42,135,684 bp from pter
End:
42,135,701 bp from pter
Size:
18 bases
Orientation:
Plus strand

Genomic View for GC06P042135 Gene

Genes around GC06P042135 on UCSC Golden Path with GeneCards custom track

GC06P042135 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC06P042135 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC06P042135 Gene

ORGUL Member Location for GC06P042135 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC06P042135 Gene

Proteins for GC06P042135 Gene

Post-translational modifications for GC06P042135 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC06P042135 Gene

Domains & Families for GC06P042135 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC06P042135 Gene

Function for GC06P042135 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC06P042135 Gene

Localization for GC06P042135 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC06P042135 Gene

Pathways & Interactions for GC06P042135 Gene

SuperPathways for GC06P042135 Gene

No Data Available

Interacting Proteins for GC06P042135 Gene

Gene Ontology (GO) - Biological Process for GC06P042135 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC06P042135 Gene

Drugs & Compounds for GC06P042135 Gene

No Compound Related Data Available

Transcripts for GC06P042135 Gene

fRNAdb Secondary structures for GC06P042135 Gene

  • FR319248

Alternative Splicing Database (ASD) splice patterns (SP) for GC06P042135 Gene

No ASD Table

Relevant External Links for GC06P042135 Gene

GeneLoc Exon Structure for
GC06P042135

No data available for mRNA/cDNA for GC06P042135 Gene

Expression for GC06P042135 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC06P042135 Gene

Orthologs for GC06P042135 Gene

No data available for Orthologs and Evolution for GC06P042135 Gene

Paralogs for GC06P042135 Gene

No data available for Paralogs for GC06P042135 Gene

Variants for GC06P042135 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC06P042135 Gene

Disorders for GC06P042135 Gene

No disorders were found for GC06P042135 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC06P042135 Gene

Publications for GC06P042135 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen J.S. … Haussler D. (PLoS Comput. Biol. 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1

Products for GC06P042135 Gene

Sources for GC06P042135 Gene

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