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Aliases for GC06P041058 Gene

Subcategory (RNA class) for GC06P041058 Gene

tRNA

Quality Score for this RNA gene is

2

Aliases for GC06P041058 Gene

No Aliases found

ORGUL Members for GC06P041058 Gene

No data available for External Ids for GC06P041058 Gene

Summaries for GC06P041058 Gene

GeneCards Summary for GC06P041058 Gene

GC06P041058 is an RNA Gene, and is affiliated with the tRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC06P041058 Gene

Genomics for GC06P041058 Gene

Regulatory Elements for GC06P041058 Gene

Enhancers for GC06P041058 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06G037704 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.7 +0.6 633 1.9 ATF1 YY1 ZNF121 GLIS2 KLF7 KLF13 KDM4B ZNF263 SP3 REST MDGA1 TBC1D22B GC06P041058 ENSG00000225945
GH06G037713 0.8 ENCODE 0.4 +9.0 8950 1.3 TBP CBX3 TBL1XR1 ZNF121 EGR1 FOS ZNF623 ZNF592 MTA1 SMARCA4 MDGA1 GC06P041058 ENSG00000225945
GH06G037791 1.4 Ensembl ENCODE 0.2 +86.5 86475 1.0 HDGF FOXA2 PKNOX1 MLX ARNT ZFP64 ARID4B SIN3A DMAP1 ZNF2 CMTR1 MDGA1 BTBD9-AS1 ENSG00000225945 GC06P041058
GH06G037782 1.3 FANTOM5 Ensembl ENCODE 0.2 +78.9 78921 2.2 CTCF SUZ12 ZIC2 RAD21 YY1 ZNF664 ZNF121 ZFHX2 POLR2A EED MDGA1 ENSG00000225945 ZFAND3 GC06P041058
GH06G037717 0.6 ENCODE 0.4 +13.2 13186 1.6 JUND GATA2 BHLHE40 CEBPB SMAD4 FOS NR2F2 MDGA1 GC06P041058 ENSG00000225945
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC06P041058 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC06P041058 Gene

Chromosome:
6
Start:
37,705,026 bp from pter
End:
37,705,098 bp from pter
Size:
73 bases
Orientation:
Plus strand

Genomic View for GC06P041058 Gene

Genes around GC06P041058 on UCSC Golden Path with GeneCards custom track

GC06P041058 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC06P041058 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC06P041058 Gene

Proteins for GC06P041058 Gene

Post-translational modifications for GC06P041058 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC06P041058 Gene

Domains & Families for GC06P041058 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC06P041058 Gene

Function for GC06P041058 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC06P041058 Gene

Localization for GC06P041058 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC06P041058 Gene

Pathways & Interactions for GC06P041058 Gene

SuperPathways for GC06P041058 Gene

No Data Available

Interacting Proteins for GC06P041058 Gene

Gene Ontology (GO) - Biological Process for GC06P041058 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC06P041058 Gene

Drugs & Compounds for GC06P041058 Gene

No Compound Related Data Available

Transcripts for GC06P041058 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC06P041058 Gene

No ASD Table

Relevant External Links for GC06P041058 Gene

GeneLoc Exon Structure for
GC06P041058

No data available for mRNA/cDNA for GC06P041058 Gene

Expression for GC06P041058 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC06P041058 Gene

Orthologs for GC06P041058 Gene

No data available for Orthologs and Evolution for GC06P041058 Gene

Paralogs for GC06P041058 Gene

No data available for Paralogs for GC06P041058 Gene

Variants for GC06P041058 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC06P041058 Gene

Disorders for GC06P041058 Gene

No disorders were found for GC06P041058 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC06P041058 Gene

Publications for GC06P041058 Gene

  1. tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. (PMID: 9023104) Lowe T.M. … Eddy S.R. (Nucleic Acids Res. 1997) 1
  2. The tertiary structure of tRNA and the development of the genetic code. (PMID: 8256282) Hou Y.M. (Trends Biochem. Sci. 1993) 1

Products for GC06P041058 Gene

Sources for GC06P041058 Gene

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