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Aliases for GC06P040751 Gene

Subcategory (RNA class) for GC06P040751 Gene


Quality Score for this RNA gene is


Aliases for GC06P040751 Gene

No Aliases found

ORGUL Members for GC06P040751 Gene

No data available for External Ids for GC06P040751 Gene

Summaries for GC06P040751 Gene

GeneCards Summary for GC06P040751 Gene

GC06P040751 is an RNA Gene, and is affiliated with the snoRNA class.

fRNAdb sequence ontologies for GC06P040751 Gene - the ORGUL cluster for this gene includes several descriptions:

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

  • H_ACA_box_snoRNA: Members of the box H/ACA family contain an ACA triplet, exactly 3 nt upstream from the 3' end and an H-box in a hinge region that links two structurally similar functional domains of the molecule. Both boxes are important for snoRNA biosynthesis and function. A few box H/ACA snoRNAs are involved in rRNA processing; most others are known or predicted to participate in selection of uridine nucleosides in rRNA to be converted to pseudouridines. Site selection is mediated by direct base pairing of the snoRNA with rRNA through one or both targeting domains.

View fRNAdb secondary structures for GC06P040751

Additional gene information for GC06P040751 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC06P040751 Gene

Genomics for GC06P040751 Gene

Regulatory Elements for GC06P040751 Gene

Enhancers for GC06P040751 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06H035623 1 Ensembl ENCODE dbSUPER 0.3 -27.5 -27531 1 CTCF ZNF654 TEAD1 ZNF384 RAD21 ENSG00000212579 FKBP5 ARMC12 ENSG00000232909 SLC26A8 RPL36P9 GC06P040751
GH06H035646 0.4 dbSUPER 0.7 -4.2 -4236 1.4 BCOR ZNF121 ENSG00000228559 TEAD3 GC06P040751 RPL36P9
GH06H035615 0.8 Ensembl ENCODE dbSUPER 0.3 -35.4 -35377 1.1 ENSG00000212579 FKBP5 ARMC12 ENSG00000232909 ENSG00000228559 RPL36P9 GC06P040751
GH06H035642 0.5 dbSUPER 0.4 -8.6 -8647 1.6 BCOR ZMYM3 EMSY ENSG00000228559 FKBP5 ARMC12 ENSG00000232909 TEAD3 TAF11 TULP1 GC06P040751 RPL36P9
GH06H035635 0.5 dbSUPER 0.4 -13.8 -13809 4.7 ZNF664 FOXA2 CEBPG NR3C1 FKBP5 ARMC12 ENSG00000232909 ENSG00000228559 TEAD3 TULP1 GC06P040751 RPL36P9
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC06P040751 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC06P040751 Gene

Genomic Locations for GC06P040751 Gene
129 bases
Plus strand

Genomic View for GC06P040751 Gene

Genes around GC06P040751 on UCSC Golden Path with GeneCards custom track

GC06P040751 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC06P040751 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC06P040751 Gene

ORGUL Member Location for GC06P040751 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC06P040751 Gene

Proteins for GC06P040751 Gene

Post-translational modifications for GC06P040751 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC06P040751 Gene

Domains & Families for GC06P040751 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC06P040751 Gene

Function for GC06P040751 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC06P040751 Gene

Localization for GC06P040751 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC06P040751 Gene

Pathways & Interactions for GC06P040751 Gene

SuperPathways for GC06P040751 Gene

No Data Available

Interacting Proteins for GC06P040751 Gene

Gene Ontology (GO) - Biological Process for GC06P040751 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC06P040751 Gene

Drugs & Compounds for GC06P040751 Gene

No Compound Related Data Available

Transcripts for GC06P040751 Gene

fRNAdb Secondary structures for GC06P040751 Gene

  • FR070811
  • FR026469

Alternative Splicing Database (ASD) splice patterns (SP) for GC06P040751 Gene

No ASD Table

Relevant External Links for GC06P040751 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC06P040751 Gene

Expression for GC06P040751 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC06P040751 Gene

Orthologs for GC06P040751 Gene

No data available for Orthologs and Evolution for GC06P040751 Gene

Paralogs for GC06P040751 Gene

No data available for Paralogs for GC06P040751 Gene

Variants for GC06P040751 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC06P040751 Gene

Disorders for GC06P040751 Gene

No disorders were found for GC06P040751 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC06P040751 Gene

Publications for GC06P040751 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Human box H/ACA pseudouridylation guide RNA machinery. (PMID: 15199136) Kiss AM … Kiss T (Molecular and cellular biology 2004) 1
  4. Mapping to nucleotide resolution of pseudouridine residues in large subunit ribosomal RNAs from representative eukaryotes, prokaryotes, archaebacteria, mitochondria and chloroplasts. (PMID: 9047361) Ofengand J … Bakin A (Journal of molecular biology 1997) 1

Products for GC06P040751 Gene

Sources for GC06P040751 Gene

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