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GC05M111236 Gene(RNA Gene)

 

GCID:
GC05M111236
GIFtS:
5
Genes Participants
UDN Logo

Aliases for GC05M111236 Gene

Subcategory (RNA class) for GC05M111236 Gene

lncRNA

Quality Score for this RNA gene is

0

Aliases for GC05M111236 Gene

No Aliases found

ORGUL Members for GC05M111236 Gene

No data available for External Ids for GC05M111236 Gene

Summaries for GC05M111236 Gene

GeneCards Summary for GC05M111236 Gene

GC05M111236 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC05M111236 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC05M111236 Gene

Genomics for GC05M111236 Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for GC05M111236 Gene

Promoters and enhancers for GC05M111236 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH05I111223 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.4 +5.6 5593 16.7 HDGF PKNOX1 IRF4 ZNF121 GLIS2 ZNF207 ATF7 KLF7 FOS RUNX3 CAMK4 WDR36 RPS3AP21 ENSG00000249318 TSLP GC05M111236
GH05I111241 Enhancer 0.4 dbSUPER 0.4 -5.6 -5624 2.5 MITF ZNF335 ENSG00000249318 TSLP CAMK4 GC05P111246 GC05M111236
GH05I111245 Enhancer 0.3 dbSUPER 0.4 -8.8 -8775 1.3 CREB1 GC05P111246 ENSG00000249318 TSLP GC05M111236 CAMK4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC05M111236 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC05M111236 Gene

Genomic Locations for GC05M111236 Gene
chr5:111,236,778-111,237,247
(GRCh38/hg38)
Size:
470 bases
Orientation:
Minus strand

Genomic View for GC05M111236 Gene

Genes around GC05M111236 on UCSC Golden Path with GeneCards custom track

GC05M111236 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC05M111236 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC05M111236 Gene

Proteins for GC05M111236 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for GC05M111236 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC05M111236 Gene

Domains & Families for GC05M111236 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC05M111236 Gene

Function for GC05M111236 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC05M111236 Gene

Localization for GC05M111236 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC05M111236 Gene

Pathways & Interactions for GC05M111236 Gene

SuperPathways for GC05M111236 Gene

PathCards logo More details on SuperPathways for GC05M111236
No Data Available

Interacting Proteins for GC05M111236 Gene

Gene Ontology (GO) - Biological Process for GC05M111236 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC05M111236 Gene

Drugs & Compounds for GC05M111236 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for GC05M111236 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Alternative Splicing Database (ASD) splice patterns (SP) for GC05M111236 Gene

No ASD Table

Relevant External Links for GC05M111236 Gene

GeneLoc Exon Structure for
GC05M111236

No data available for mRNA/cDNA for GC05M111236 Gene

Expression for GC05M111236 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC05M111236 Gene

Orthologs for GC05M111236 Gene

No data available for Orthologs and Evolution for GC05M111236 Gene

Paralogs for GC05M111236 Gene

No data available for Paralogs for GC05M111236 Gene

Variants for GC05M111236 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC05M111236 Gene

Disorders for GC05M111236 Gene

No disorders were found for GC05M111236 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC05M111236 Gene

Publications for GC05M111236 Gene

No publications were found for GC05M111236 Gene.

Products for GC05M111236 Gene

Sources for GC05M111236 Gene

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