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GC04P004888 Gene(RNA Gene)

 

GCID:
GC04P004888
GIFtS:
3
Genes Participants
UDN Logo

Aliases for GC04P004888 Gene

Subcategory (RNA class) for GC04P004888 Gene

lncRNA

Quality Score for this RNA gene is

0

Aliases for GC04P004888 Gene

No Aliases found

ORGUL Members for GC04P004888 Gene

No data available for External Ids for GC04P004888 Gene

Summaries for GC04P004888 Gene

GeneCards Summary for GC04P004888 Gene

GC04P004888 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC04P004888 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC04P004888 Gene

Genomics for GC04P004888 Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for GC04P004888 Gene

Promoters and enhancers for GC04P004888 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH04I004859 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE 0.3 -27.7 -27661 2.7 ARID4B SIN3A ZNF48 GLIS2 FOS ATF7 SP3 SP5 NFYC KAT8 MSX1 GC04P004888
GH04I004864 Enhancer 0.6 Ensembl 0.3 -21.9 -21918 3.4 CTCF SOX6 SUZ12 MCM5 MNT ZBTB5 CBX8 POLR2A ZNF143 NBN MSX1 GC04P004888
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC04P004888 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC04P004888 Gene

Genomic Locations for GC04P004888 Gene
chr4:4,888,121-4,895,280
(GRCh38/hg38)
Size:
7,160 bases
Orientation:
Plus strand

Genomic View for GC04P004888 Gene

Genes around GC04P004888 on UCSC Golden Path with GeneCards custom track

GC04P004888 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC04P004888 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC04P004888 Gene

Proteins for GC04P004888 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for GC04P004888 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC04P004888 Gene

Domains & Families for GC04P004888 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC04P004888 Gene

Function for GC04P004888 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC04P004888 Gene

Localization for GC04P004888 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC04P004888 Gene

Pathways & Interactions for GC04P004888 Gene

SuperPathways for GC04P004888 Gene

PathCards logo More details on SuperPathways for GC04P004888
No Data Available

Interacting Proteins for GC04P004888 Gene

Gene Ontology (GO) - Biological Process for GC04P004888 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC04P004888 Gene

Drugs & Compounds for GC04P004888 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for GC04P004888 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Alternative Splicing Database (ASD) splice patterns (SP) for GC04P004888 Gene

No ASD Table

Relevant External Links for GC04P004888 Gene

GeneLoc Exon Structure for
GC04P004888

No data available for mRNA/cDNA for GC04P004888 Gene

Expression for GC04P004888 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC04P004888 Gene

Orthologs for GC04P004888 Gene

No data available for Orthologs and Evolution for GC04P004888 Gene

Paralogs for GC04P004888 Gene

No data available for Paralogs for GC04P004888 Gene

Variants for GC04P004888 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC04P004888 Gene

Disorders for GC04P004888 Gene

No disorders were found for GC04P004888 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC04P004888 Gene

Publications for GC04P004888 Gene

No publications were found for GC04P004888 Gene.

Products for GC04P004888 Gene

Sources for GC04P004888 Gene

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