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Aliases for GC04P004042 Gene

Subcategory (RNA class) for GC04P004042 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for GC04P004042 Gene

No Aliases found

ORGUL Members for GC04P004042 Gene

No data available for External Ids for GC04P004042 Gene

Summaries for GC04P004042 Gene

GeneCards Summary for GC04P004042 Gene

GC04P004042 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for GC04P004042 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for GC04P004042

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC04P004042 Gene

Genomics for GC04P004042 Gene

Regulatory Elements for GC04P004042 Gene

Enhancers for GC04P004042 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04G004046 0.6 ENCODE 0.7 +4.9 4853 1.7 PRDM6 RNF2 L3MBTL2 POLR2A HMBOX1 SPI1 EZH2 GC04P004042 GC04M004021
GH04G004031 0.8 Ensembl ENCODE 0.4 -9.7 -9694 1.7 RFX1 RFX3 IRF1 EP300 ZNF652 ENPP7P9 ENSG00000271977 FAM86EP LOC101928217 GC04P004042
GH04G004048 0.4 ENCODE 0.4 +5.8 5752 0.0 L3MBTL2 GC04M004021 GC04P004042
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC04P004042 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC04P004042 Gene

Chromosome:
4
Start:
4,042,553 bp from pter
End:
4,042,581 bp from pter
Size:
29 bases
Orientation:
Plus strand

Genomic View for GC04P004042 Gene

Genes around GC04P004042 on UCSC Golden Path with GeneCards custom track

GC04P004042 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC04P004042 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC04P004042 Gene

ORGUL Member Location for GC04P004042 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC04P004042 Gene

Proteins for GC04P004042 Gene

Post-translational modifications for GC04P004042 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC04P004042 Gene

Domains & Families for GC04P004042 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC04P004042 Gene

Function for GC04P004042 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC04P004042 Gene

Localization for GC04P004042 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC04P004042 Gene

Pathways & Interactions for GC04P004042 Gene

SuperPathways for GC04P004042 Gene

No Data Available

Interacting Proteins for GC04P004042 Gene

Gene Ontology (GO) - Biological Process for GC04P004042 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC04P004042 Gene

Drugs & Compounds for GC04P004042 Gene

No Compound Related Data Available

Transcripts for GC04P004042 Gene

fRNAdb Secondary structures for GC04P004042 Gene

  • FR247222
  • FR104843

Alternative Splicing Database (ASD) splice patterns (SP) for GC04P004042 Gene

No ASD Table

Relevant External Links for GC04P004042 Gene

GeneLoc Exon Structure for
GC04P004042

No data available for mRNA/cDNA for GC04P004042 Gene

Expression for GC04P004042 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC04P004042 Gene

Orthologs for GC04P004042 Gene

No data available for Orthologs and Evolution for GC04P004042 Gene

Paralogs for GC04P004042 Gene

No data available for Paralogs for GC04P004042 Gene

Variants for GC04P004042 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC04P004042 Gene

Disorders for GC04P004042 Gene

No disorders were found for GC04P004042 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC04P004042 Gene

Publications for GC04P004042 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A. … Carmell M.A. (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1

Products for GC04P004042 Gene

Sources for GC04P004042 Gene

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