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Aliases for GC04P000975 Gene

Subcategory (RNA class) for GC04P000975 Gene

piRNA

Quality Score for this RNA gene is

16

Aliases for GC04P000975 Gene

No Aliases found

ORGUL Members for GC04P000975 Gene

No data available for External Ids for GC04P000975 Gene

Summaries for GC04P000975 Gene

GeneCards Summary for GC04P000975 Gene

GC04P000975 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for GC04P000975 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for GC04P000975

Additional gene information for GC04P000975 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC04P000975 Gene

Genomics for GC04P000975 Gene

Regulatory Elements for GC04P000975 Gene

Enhancers for GC04P000975 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04H000969 1 ENCODE dbSUPER 0.7 -4.2 -4157 3 MXI1 ESRRA KLF1 KLF17 ZBTB40 ZIC2 ZFHX2 GLIS2 CTBP1 POLR2A DGKQ GC04P000975 PIR57975
GH04H000973 1 ENCODE dbSUPER 0.7 -2.1 -2124 0 CTCF LEF1 L3MBTL2 NR4A1 NRF1 ZBTB11 BACH1 MNT GABPA ZNF592 DGKQ SLC26A1 GC04P000975 PIR57975
GH04H000968 0.5 dbSUPER 0.4 -6.6 -6583 0 GLIS2 KLF1 POLR2A MYNN ZIC2 DGKQ PIR57975 GC04P000975
GH04H000961 0.5 dbSUPER 0.4 -12.9 -12876 2 HIC1 CTCF KLF1 SLC26A1 DGKQ PIR57975 GC04P000975
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC04P000975 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC04P000975 Gene

Chromosome:
4
Start:
975,771 bp from pter
End:
975,799 bp from pter
Size:
29 bases
Orientation:
Plus strand

Genomic View for GC04P000975 Gene

Genes around GC04P000975 on UCSC Golden Path with GeneCards custom track

GC04P000975 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC04P000975 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC04P000975 Gene

ORGUL Member Location for GC04P000975 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC04P000975 Gene

Proteins for GC04P000975 Gene

Post-translational modifications for GC04P000975 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC04P000975 Gene

Domains & Families for GC04P000975 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC04P000975 Gene

Function for GC04P000975 Gene

Phenotypes From GWAS Catalog for GC04P000975 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for GC04P000975 Gene

Localization for GC04P000975 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC04P000975 Gene

Pathways & Interactions for GC04P000975 Gene

SuperPathways for GC04P000975 Gene

No Data Available

Interacting Proteins for GC04P000975 Gene

Gene Ontology (GO) - Biological Process for GC04P000975 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC04P000975 Gene

Drugs & Compounds for GC04P000975 Gene

No Compound Related Data Available

Transcripts for GC04P000975 Gene

fRNAdb Secondary structures for GC04P000975 Gene

  • FR239910
  • FR021200

Alternative Splicing Database (ASD) splice patterns (SP) for GC04P000975 Gene

No ASD Table

Relevant External Links for GC04P000975 Gene

GeneLoc Exon Structure for
GC04P000975

No data available for mRNA/cDNA for GC04P000975 Gene

Expression for GC04P000975 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC04P000975 Gene

Orthologs for GC04P000975 Gene

No data available for Orthologs and Evolution for GC04P000975 Gene

Paralogs for GC04P000975 Gene

No data available for Paralogs for GC04P000975 Gene

Variants for GC04P000975 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC04P000975 Gene

Disorders for GC04P000975 Gene

No disorders were found for GC04P000975 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC04P000975 Gene

Publications for GC04P000975 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for GC04P000975 Gene

Sources for GC04P000975 Gene

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