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Aliases for GC02M162149 Gene

Subcategory (RNA class) for GC02M162149 Gene

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Quality Score for this RNA gene is

6

Aliases for GC02M162149 Gene

No Aliases found

ORGUL Members for GC02M162149 Gene

No data available for External Ids for GC02M162149 Gene

Summaries for GC02M162149 Gene

GeneCards Summary for GC02M162149 Gene

GC02M162149 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC02M162149 Gene

  • ncRNA: An RNA transcript that does not encode for a protein rather the RNA molecule is the gene product.

View fRNAdb secondary structures for GC02M162149

Additional gene information for GC02M162149 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC02M162149 Gene

Genomics for GC02M162149 Gene

Regulatory Elements for GC02M162149 Gene

Enhancers for GC02M162149 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02H162126 0.9 Ensembl ENCODE 0.3 +23.0 22967 0 PKNOX1 BMI1 DPF2 BCL11A IKZF1 TARDBP NBN ETV6 IKZF2 CREM LOC101929532 GC02M162149 GC02M162150
GH02H162117 0.8 Ensembl ENCODE 0.3 +30.6 30634 2 SMARCE1 CTBP1 JUND HLF FOS DPF2 RAD21 DPP4 ENSG00000224076 ENSG00000251621 SLC4A10 TIMM8AP1 ENSG00000230918 LOC101929532 GC02M162149 GC02M162150
GH02H162116 0.7 ENCODE 0.3 +32.6 32622 0 SOX5 SOX13 GATAD2A FOXA2 ATF1 ZNF792 SAP130 FOXA3 HLF CEBPG LOC101929532 GC02M162149 GC02M162150
GH02H162123 0.7 ENCODE 0.3 +25.2 25192 0 GATAD2A CTCF ZNF654 ZNF511 FOXA3 TRIM22 ARID4B REST RAD21 ZNF592 ENSG00000224076 ENSG00000251621 SLC4A10 LOC101929532 GC02M162149 GC02M162150
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC02M162149 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC02M162149 Gene

Chromosome:
2
Start:
162,149,086 bp from pter
End:
162,149,187 bp from pter
Size:
102 bases
Orientation:
Minus strand

Genomic View for GC02M162149 Gene

Genes around GC02M162149 on UCSC Golden Path with GeneCards custom track

GC02M162149 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC02M162149 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC02M162149 Gene

ORGUL Member Location for GC02M162149 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC02M162149 Gene

Proteins for GC02M162149 Gene

Post-translational modifications for GC02M162149 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC02M162149 Gene

Domains & Families for GC02M162149 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC02M162149 Gene

Function for GC02M162149 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC02M162149 Gene

Localization for GC02M162149 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC02M162149 Gene

Pathways & Interactions for GC02M162149 Gene

SuperPathways for GC02M162149 Gene

No Data Available

Interacting Proteins for GC02M162149 Gene

Gene Ontology (GO) - Biological Process for GC02M162149 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC02M162149 Gene

Drugs & Compounds for GC02M162149 Gene

No Compound Related Data Available

Transcripts for GC02M162149 Gene

fRNAdb Secondary structures for GC02M162149 Gene

  • FR273298

Alternative Splicing Database (ASD) splice patterns (SP) for GC02M162149 Gene

No ASD Table

Relevant External Links for GC02M162149 Gene

GeneLoc Exon Structure for
GC02M162149

No data available for mRNA/cDNA for GC02M162149 Gene

Expression for GC02M162149 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC02M162149 Gene

Orthologs for GC02M162149 Gene

No data available for Orthologs and Evolution for GC02M162149 Gene

Paralogs for GC02M162149 Gene

No data available for Paralogs for GC02M162149 Gene

Variants for GC02M162149 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC02M162149 Gene

Disorders for GC02M162149 Gene

No disorders were found for GC02M162149 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC02M162149 Gene

Publications for GC02M162149 Gene

  1. The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts. (PMID: 18089548) Genome Information Integration Project And H-Invitational 2 … Gojobori T (Nucleic acids research 2008) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Integrative annotation of 21,037 human genes validated by full-length cDNA clones. (PMID: 15103394) Imanishi T … Sugano S (PLoS biology 2004) 1

Products for GC02M162149 Gene

Sources for GC02M162149 Gene

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