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GC01P034113 Gene(RNA Gene)

 

GCID:
GC01P034113
GIFtS:
3
Genes Participants
UDN Logo

Aliases for GC01P034113 Gene

Subcategory (RNA class) for GC01P034113 Gene

rRNA

Quality Score for this RNA gene is

12

Aliases for GC01P034113 Gene

No Aliases found

ORGUL Members for GC01P034113 Gene

No data available for External Ids for GC01P034113 Gene

Summaries for GC01P034113 Gene

GeneCards Summary for GC01P034113 Gene

GC01P034113 is an RNA Gene, and is affiliated with the rRNA class.

fRNAdb sequence ontologies for GC01P034113 Gene

  • rRNA_5S: 5S ribosomal RNA (5S rRNA) is a component of the large ribosomal subunit in both prokaryotes and eukaryotes. In eukaryotes, it is synthesised by RNA polymerase III (the other eukaryotic rRNAs are cleaved from a 45S precursor synthesised by RNA polymerase I). In Xenopus oocytes, it has been shown that fingers 4-7 of the nine-zinc finger transcription factor TFIIIA can bind to the central region of 5S RNA. Thus, in addition to positively regulating 5S rRNA transcription, TFIIIA also stabilises 5S rRNA until it is required for transcription.

Additional gene information for GC01P034113 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC01P034113 Gene

Genomics for GC01P034113 Gene

Products:

  1. Regulatory Element

Genomic Locations for GC01P034113 Gene

Genomic Locations for GC01P034113 Gene
chr1:34,112,948-34,113,063
(GRCh38/hg38)
Size:
116 bases
Orientation:
Plus strand

Genomic View for GC01P034113 Gene

Genes around GC01P034113 on UCSC Golden Path with GeneCards custom track

GC01P034113 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC01P034113 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

No data available for GeneHancer (GH) Regulatory Elements , Cytogenetic band and RefSeq DNA sequence for GC01P034113 Gene

Proteins for GC01P034113 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for GC01P034113 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC01P034113 Gene

Domains & Families for GC01P034113 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC01P034113 Gene

Function for GC01P034113 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Animal Model Products

miRNA for GC01P034113 Gene

miRTarBase miRNAs that target GC01P034113

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for GC01P034113 Gene

Localization for GC01P034113 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC01P034113 Gene

Pathways & Interactions for GC01P034113 Gene

SuperPathways for GC01P034113 Gene

PathCards logo More details on SuperPathways for GC01P034113
No Data Available

Interacting Proteins for GC01P034113 Gene

Gene Ontology (GO) - Biological Process for GC01P034113 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC01P034113 Gene

Drugs & Compounds for GC01P034113 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for GC01P034113 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Alternative Splicing Database (ASD) splice patterns (SP) for GC01P034113 Gene

No ASD Table

Relevant External Links for GC01P034113 Gene

GeneLoc Exon Structure for
GC01P034113

No data available for mRNA/cDNA for GC01P034113 Gene

Expression for GC01P034113 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC01P034113 Gene

Orthologs for GC01P034113 Gene

No data available for Orthologs and Evolution for GC01P034113 Gene

Paralogs for GC01P034113 Gene

No data available for Paralogs for GC01P034113 Gene

Variants for GC01P034113 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC01P034113 Gene

Disorders for GC01P034113 Gene

No disorders were found for GC01P034113 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC01P034113 Gene

Publications for GC01P034113 Gene

  1. 5S Ribosomal RNA Database. (PMID: 11752286) Szymanski M … Barciszewski J (Nucleic acids research 2002) 1
  2. Crystal structure of the ribosome at 5.5 A resolution. (PMID: 11283358) Yusupov MM … Noller HF (Science (New York, N.Y.) 2001) 1
  3. The role of the central zinc fingers of transcription factor IIIA in binding to 5 S RNA. (PMID: 10926492) Searles MA … Klug A (Journal of molecular biology 2000) 1

Products for GC01P034113 Gene

Sources for GC01P034113 Gene

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