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Aliases for GC01M046749 Gene

Subcategory (RNA class) for GC01M046749 Gene

lncRNA

Quality Score for this RNA gene is

1

Aliases for GC01M046749 Gene

No Aliases found

No data available for External Ids for GC01M046749 Gene

Summaries for GC01M046749 Gene

GeneCards Summary for GC01M046749 Gene

GC01M046749 is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for GC01M046749 Gene

  • ncRNA: An RNA transcript that does not encode for a protein rather the RNA molecule is the gene product.

Additional gene information for GC01M046749 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC01M046749 Gene

Genomics for GC01M046749 Gene

Regulatory Elements for GC01M046749 Gene

Enhancers for GC01M046749 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01H046804 1.1 Ensembl ENCODE dbSUPER 0.3 -27.9 -27891 4 PKNOX1 HLF CEBPB MAX REST NR3C1 NR2F2 GATA3 CREB1 PRDM10 CYP4B1 CYP4A11 CYP4X1 GC01M046749 LOC100533627
GH01H046769 0.8 ENCODE dbSUPER 0.4 +9.0 9015 0 SMARCE1 FOS DPF2 ZNF592 LOC105378699 GC01M046749
GH01H046767 0.6 dbSUPER 0.4 +10.3 10296 1 MAFF ZNF316 MAFG NFE2 EMSY MAFK NFE2L2 LOC105378699 GC01M046749
GH01H046789 0.6 dbSUPER 0.4 -11.2 -11204 1 SOX5 SOX13 TCF12 FOXA2 FOXA3 SPI1 GC01M046749 LOC100533627
GH01H046788 0.5 dbSUPER 0.4 -10.1 -10121 0 SOX5 SOX13 FOXA2 FOXA3 GC01M046749 LOC100533627
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC01M046749 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC01M046749 Gene

Chromosome:
1
Start:
46,749,930 bp from pter
End:
46,778,258 bp from pter
Size:
28,329 bases
Orientation:
Minus strand

Genomic View for GC01M046749 Gene

Genes around GC01M046749 on UCSC Golden Path with GeneCards custom track

GC01M046749 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC01M046749 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC01M046749 Gene

ORGUL Member Location for GC01M046749 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC01M046749 Gene

Proteins for GC01M046749 Gene

Post-translational modifications for GC01M046749 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC01M046749 Gene

Domains & Families for GC01M046749 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC01M046749 Gene

Function for GC01M046749 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC01M046749 Gene

Localization for GC01M046749 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC01M046749 Gene

Pathways & Interactions for GC01M046749 Gene

SuperPathways for GC01M046749 Gene

No Data Available

Interacting Proteins for GC01M046749 Gene

Gene Ontology (GO) - Biological Process for GC01M046749 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC01M046749 Gene

Drugs & Compounds for GC01M046749 Gene

No Compound Related Data Available

Transcripts for GC01M046749 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC01M046749 Gene

No ASD Table

Relevant External Links for GC01M046749 Gene

GeneLoc Exon Structure for
GC01M046749

No data available for mRNA/cDNA for GC01M046749 Gene

Expression for GC01M046749 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC01M046749 Gene

Orthologs for GC01M046749 Gene

No data available for Orthologs and Evolution for GC01M046749 Gene

Paralogs for GC01M046749 Gene

No data available for Paralogs for GC01M046749 Gene

Variants for GC01M046749 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC01M046749 Gene

Disorders for GC01M046749 Gene

No disorders were found for GC01M046749 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC01M046749 Gene

Publications for GC01M046749 Gene

  1. The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts. (PMID: 18089548) Genome Information Integration Project And H-Invitational 2 … Gojobori T (Nucleic acids research 2008) 1
  2. Identification and characterization of human non-coding RNAs with tissue-specific expression. (PMID: 17451645) Sasaki YT … Hirose T (Biochemical and biophysical research communications 2007) 1
  3. Integrative annotation of 21,037 human genes validated by full-length cDNA clones. (PMID: 15103394) Imanishi T … Sugano S (PLoS biology 2004) 1

Products for GC01M046749 Gene

Sources for GC01M046749 Gene

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