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GC01M033423 Gene(RNA Gene)

 

GCID:
GC01M033423
GIFtS:
5
Genes Participants
UDN Logo

Aliases for GC01M033423 Gene

Subcategory (RNA class) for GC01M033423 Gene

lncRNA

Quality Score for this RNA gene is

10

Aliases for GC01M033423 Gene

No Aliases found

ORGUL Members for GC01M033423 Gene

No data available for External Ids for GC01M033423 Gene

Summaries for GC01M033423 Gene

GeneCards Summary for GC01M033423 Gene

GC01M033423 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC01M033423 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC01M033423 Gene

Genomics for GC01M033423 Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for GC01M033423 Gene

Promoters and enhancers for GC01M033423 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH01I033455 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.8 -4.9 -4933 1.1 HDGF ELF3 ATF1 PKNOX1 BATF IRF4 RAD21 ZNF335 ZNF366 ZNF143 ZBTB8A RBBP4 ZBTB8B AK2 ZSCAN20 ZBTB8OS CSMD2 GC01M033423 TLR12P
GH01I033459 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -9.7 -9657 2.8 ZNF76 BMI1 BATF IRF4 ZNF207 ATF7 ETV6 BCLAF1 IKZF2 RUNX3 RBBP4 S100PBP ZSCAN20 ZBTB8A TMEM54 RNF19B TLR12P GC01M033423
GH01I033431 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.4 +17.2 17170 4 ATF1 PKNOX1 FOXA2 ARID4B ETS1 FOS YY2 ZNF662 KAT8 ATF4 RBBP4 A3GALT2 ZBTB8A ZSCAN20 PHC2 ZBTB8B S100PBP CSMD2 GC01M033423
GH01I033458 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 -7.5 -7529 0.9 ZFP64 BATF IRF4 ZNF213 ZNF366 ATF7 KLF7 FOS IKZF2 RUNX3 RBBP4 ENSG00000270115 ZSCAN20 AK2 S100PBP ZBTB8A ZNF362 ZBTB8B PHC2 AZIN2
GH01I033429 Promoter/Enhancer 1.6 Ensembl ENCODE dbSUPER 0.3 +20.4 20448 2.1 ARNT SIN3A ZNF48 GLIS2 ELK1 ZNF143 FOS NFYC REST MBD2 PHC2 A3GALT2 GC01M033423 GC01P033403
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC01M033423 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC01M033423 Gene

Genomic Locations for GC01M033423 Gene
chr1:33,423,905-33,451,126
(GRCh38/hg38)
Size:
27,222 bases
Orientation:
Minus strand

Genomic View for GC01M033423 Gene

Genes around GC01M033423 on UCSC Golden Path with GeneCards custom track

GC01M033423 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC01M033423 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC01M033423 Gene

Proteins for GC01M033423 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for GC01M033423 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC01M033423 Gene

Domains & Families for GC01M033423 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC01M033423 Gene

Function for GC01M033423 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Animal Model Products

miRNA for GC01M033423 Gene

miRTarBase miRNAs that target GC01M033423

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for GC01M033423 Gene

Localization for GC01M033423 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC01M033423 Gene

Pathways & Interactions for GC01M033423 Gene

SuperPathways for GC01M033423 Gene

PathCards logo More details on SuperPathways for GC01M033423
No Data Available

Interacting Proteins for GC01M033423 Gene

Gene Ontology (GO) - Biological Process for GC01M033423 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC01M033423 Gene

Drugs & Compounds for GC01M033423 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for GC01M033423 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Alternative Splicing Database (ASD) splice patterns (SP) for GC01M033423 Gene

No ASD Table

Relevant External Links for GC01M033423 Gene

GeneLoc Exon Structure for
GC01M033423

No data available for mRNA/cDNA for GC01M033423 Gene

Expression for GC01M033423 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC01M033423 Gene

Orthologs for GC01M033423 Gene

No data available for Orthologs and Evolution for GC01M033423 Gene

Paralogs for GC01M033423 Gene

No data available for Paralogs for GC01M033423 Gene

Variants for GC01M033423 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC01M033423 Gene

Disorders for GC01M033423 Gene

No disorders were found for GC01M033423 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC01M033423 Gene

Publications for GC01M033423 Gene

No publications were found for GC01M033423 Gene.

Products for GC01M033423 Gene

Sources for GC01M033423 Gene

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