Free for academic non-profit institutions. Other users need a Commercial license

Aliases for GC01M033323 Gene

Subcategory (RNA class) for GC01M033323 Gene

lncRNA

Quality Score for this RNA gene is

6.2

Aliases for GC01M033323 Gene

No Aliases found

ORGUL Members for GC01M033323 Gene

No data available for External Ids for GC01M033323 Gene

Summaries for GC01M033323 Gene

GeneCards Summary for GC01M033323 Gene

GC01M033323 is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for GC01M033323 Gene - the ORGUL cluster for this gene includes several descriptions:

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

  • ncRNA: An RNA transcript that does not encode for a protein rather the RNA molecule is the gene product.

View fRNAdb secondary structures for GC01M033323

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC01M033323 Gene

Genomics for GC01M033323 Gene

Regulatory Elements for GC01M033323 Gene

Enhancers for GC01M033323 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G033327 0.9 ENCODE dbSUPER 0.7 -4.4 -4420 2.8 CTCF ZNF362 RFX1 BHLHE40 SIN3A CEBPB CEBPG JUND FOS A3GALT2 PHC2 MIR3605 GC01M033324 GC01M033323
GH01G033323 0.6 dbSUPER 0.7 -1.1 -1102 3.0 CTCF ZIC2 MCM7 SREBF1 GATA3 ZFHX2 FOS EGR2 A3GALT2 PHC2 GC01M033324 GC01M033323 MIR3605
GH01G033320 0.5 dbSUPER 0.7 +2.9 2917 0.8 ZFP69B PKNOX1 POLR2A SIN3A PHC2 A3GALT2 GC01M033324 GC01M033323
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC01M033323 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC01M033323 Gene

Chromosome:
1
Start:
33,323,625 bp from pter
End:
33,324,020 bp from pter
Size:
396 bases
Orientation:
Minus strand

Genomic View for GC01M033323 Gene

Genes around GC01M033323 on UCSC Golden Path with GeneCards custom track

GC01M033323 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC01M033323 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC01M033323 Gene

ORGUL Member Location for GC01M033323 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC01M033323 Gene

Proteins for GC01M033323 Gene

Post-translational modifications for GC01M033323 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC01M033323 Gene

Domains & Families for GC01M033323 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC01M033323 Gene

Function for GC01M033323 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC01M033323 Gene

Localization for GC01M033323 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for GC01M033323 Gene

Pathways & Interactions for GC01M033323 Gene

SuperPathways for GC01M033323 Gene

No Data Available

Interacting Proteins for GC01M033323 Gene

Gene Ontology (GO) - Biological Process for GC01M033323 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC01M033323 Gene

Drugs & Compounds for GC01M033323 Gene

No Compound Related Data Available

Transcripts for GC01M033323 Gene

fRNAdb Secondary structures for GC01M033323 Gene

  • FR024239
  • FR055653

Alternative Splicing Database (ASD) splice patterns (SP) for GC01M033323 Gene

No ASD Table

Relevant External Links for GC01M033323 Gene

GeneLoc Exon Structure for
GC01M033323

No data available for mRNA/cDNA for GC01M033323 Gene

Expression for GC01M033323 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC01M033323 Gene

Orthologs for GC01M033323 Gene

No data available for Orthologs and Evolution for GC01M033323 Gene

Paralogs for GC01M033323 Gene

No data available for Paralogs for GC01M033323 Gene

Variants for GC01M033323 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC01M033323 Gene

Disorders for GC01M033323 Gene

No disorders were found for GC01M033323 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC01M033323 Gene

Publications for GC01M033323 Gene

  1. The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts. (PMID: 18089548) . … Gojobori T. (Nucleic Acids Res. 2008) 1
  2. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen J.S. … Haussler D. (PLoS Comput. Biol. 2006) 1
  3. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1
  4. Integrative annotation of 21,037 human genes validated by full-length cDNA clones. (PMID: 15103394) Imanishi T. … Sugano S. (PLoS Biol. 2004) 1

Products for GC01M033323 Gene

Sources for GC01M033323 Gene

Content
Loading form....