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Aliases for GC01M032924 Gene

Subcategory (RNA class) for GC01M032924 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for GC01M032924 Gene

No Aliases found

No data available for External Ids for GC01M032924 Gene

Summaries for GC01M032924 Gene

GeneCards Summary for GC01M032924 Gene

GC01M032924 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for GC01M032924 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for GC01M032924

Additional gene information for GC01M032924 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC01M032924 Gene

Genomics for GC01M032924 Gene

Regulatory Elements for GC01M032924 Gene

Enhancers for GC01M032924 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01H032939 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -16.6 -16647 3 HDAC1 ATF1 TBL1XR1 TCF12 ZNF766 GATA2 EGR1 FOS CREM EGR2 RNF19B TMEM54 FNDC5 AK2 AZIN2 GC01M032924 GC01P032965
GH01H032924 0.9 ENCODE dbSUPER 0.7 -1.0 -980 1 CTCF SAP130 HLF NR2F1 RAD21 ZNF366 KLF16 ZNF341 NR2F6 PRDM1 TMEM54 FNDC5 AK2 AZIN2 GC01M032924 GC01P032965
GH01H032933 1.5 Ensembl ENCODE dbSUPER 0.4 -11.1 -11097 4 FOXA2 MLX ARID4B YY1 GATA2 ZNF143 SP5 YY2 REST KAT8 TMEM54 KPNA6 AK2 AZIN2 FNDC5 RNF19B GC01M032924 GC01P032965
GH01H032961 1.7 FANTOM5 ENCODE dbSUPER 0.3 -39.5 -39531 3 HDGF PKNOX1 ARNT ARID4B SIN3A YY1 ZNF143 ZNF207 SP3 SP5 RNF19B KHDRBS1 TMEM39B TMEM54 ENSG00000224066 RBBP4 ZSCAN20 S100PBP ZBTB8OS TXLNA
GH01H032945 1.3 Ensembl ENCODE dbSUPER 0.3 -23.8 -23820 4 PKNOX1 ARID4B EGR2 HMG20B USF2 KAT8 NFIL3 MAFF CEBPA HNF4A FNDC5 RNF19B TMEM54 GC01P032965 GC01M032924
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around GC01M032924 on UCSC Golden Path with GeneCards custom track

Genomic Location for GC01M032924 Gene

Chromosome:
1
Start:
32,924,165 bp from pter
End:
32,924,194 bp from pter
Size:
30 bases
Orientation:
Minus strand

Genomic View for GC01M032924 Gene

Genes around GC01M032924 on UCSC Golden Path with GeneCards custom track

GC01M032924 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC01M032924 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC01M032924 Gene

ORGUL Member Location for GC01M032924 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC01M032924 Gene

Proteins for GC01M032924 Gene

Post-translational modifications for GC01M032924 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC01M032924 Gene

Domains & Families for GC01M032924 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC01M032924 Gene

Function for GC01M032924 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC01M032924 Gene

Localization for GC01M032924 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC01M032924 Gene

Pathways & Interactions for GC01M032924 Gene

SuperPathways for GC01M032924 Gene

No Data Available

Interacting Proteins for GC01M032924 Gene

Gene Ontology (GO) - Biological Process for GC01M032924 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC01M032924 Gene

Drugs & Compounds for GC01M032924 Gene

No Compound Related Data Available

Transcripts for GC01M032924 Gene

fRNAdb Secondary structures for GC01M032924 Gene

  • FR005940
  • FR380103
  • FR042068

Alternative Splicing Database (ASD) splice patterns (SP) for GC01M032924 Gene

No ASD Table

Relevant External Links for GC01M032924 Gene

GeneLoc Exon Structure for
GC01M032924

No data available for mRNA/cDNA for GC01M032924 Gene

Expression for GC01M032924 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC01M032924 Gene

Orthologs for GC01M032924 Gene

No data available for Orthologs and Evolution for GC01M032924 Gene

Paralogs for GC01M032924 Gene

No data available for Paralogs for GC01M032924 Gene

Variants for GC01M032924 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for GC01M032924 Gene

Disorders for GC01M032924 Gene

No disorders were found for GC01M032924 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC01M032924 Gene

Publications for GC01M032924 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for GC01M032924 Gene

Sources for GC01M032924 Gene

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