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Aliases for GATSL2 Gene

Aliases for GATSL2 Gene

  • GATS Protein-Like 2 2 3
  • GATS Protein-Like 1 2 3
  • GATS-Like Protein 1 3
  • GATS-Like Protein 2 3
  • GATSL1 3

External Ids for GATSL2 Gene

Previous Symbols for GATSL2 Gene

  • GATSL1

Summaries for GATSL2 Gene

GeneCards Summary for GATSL2 Gene

GATSL2 (GATS Protein-Like 2) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GATSL2 Gene

Genomics for GATSL2 Gene

Genomic Location for GATSL2 Gene

Start:
74,964,818 bp from pter
End:
75,024,798 bp from pter
Size:
59,981 bases
Orientation:
Plus strand

Genomic View for GATSL2 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for GATSL2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GATSL2 Gene

Regulatory Elements for GATSL2 Gene

Proteins for GATSL2 Gene

  • Protein details for GATSL2 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A6NHX0-GATL2_HUMAN
    Recommended name:
    GATS-like protein 2
    Protein Accession:
    A6NHX0
    Secondary Accessions:
    • B9EJH9

    Protein attributes for GATSL2 Gene

    Size:
    329 amino acids
    Molecular mass:
    36056 Da
    Quaternary structure:
    No Data Available

neXtProt entry for GATSL2 Gene

Proteomics data for GATSL2 Gene at MOPED

Post-translational modifications for GATSL2 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for GATSL2 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for GATSL2 Gene

Domains for GATSL2 Gene

Protein Domains for GATSL2 Gene

InterPro:
ProtoNet:

UniProtKB/Swiss-Prot:

GATL2_HUMAN
Family:
  • Belongs to the GATS family.:
    • A6NHX0
genes like me logo Genes that share domains with GATSL2: view

No data available for Gene Families for GATSL2 Gene

Function for GATSL2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for GATSL2 Gene

Localization for GATSL2 Gene

No data available for Gene Ontology (GO) - Cellular Components for GATSL2 Gene

Pathways for GATSL2 Gene

SuperPathways for GATSL2 Gene

No Data Available

Interacting Proteins for GATSL2 Gene

Gene Ontology (GO) - Biological Process for GATSL2 Gene

None

No data available for Pathways by source for GATSL2 Gene

Transcripts for GATSL2 Gene

mRNA/cDNA for GATSL2 Gene

(1) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for GATSL2 Gene

GATS protein-like 2:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for GATSL2 Gene

No ASD Table

Relevant External Links for GATSL2 Gene

GeneLoc Exon Structure for
GATSL2
ECgene alternative splicing isoforms for
GATSL2

Expression for GATSL2 Gene

mRNA expression in normal human tissues for GATSL2 Gene

mRNA expression in normal human tissues for GATSL2 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for GATSL2 Gene

This gene is overexpressed in Muscle - Skeletal (10.7).

Integrated Proteomics: protein expression from ProteomicsDB, MOPED, and MaxQB for GATSL2 Gene

SOURCE GeneReport for Unigene cluster for GATSL2 Gene Hs.647048

genes like me logo Genes that share expressions with GATSL2: view

Orthologs for GATSL2 Gene

This gene was present in the common ancestor of chordates.

Orthologs for GATSL2 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia GATSL2 36
  • 99.9 (n)
  • 100 (a)
cow
(Bos Taurus)
Mammalia GATSL2 36
  • 91.69 (n)
  • 98.48 (a)
dog
(Canis familiaris)
Mammalia GATSL2 36
  • 88.78 (n)
  • 96.97 (a)
mouse
(Mus musculus)
Mammalia Gatsl2 36
  • 88.86 (n)
  • 97.26 (a)
Gatsl2 16
rat
(Rattus norvegicus)
Mammalia Gatsl2 36
  • 87.84 (n)
  • 97.57 (a)
chicken
(Gallus gallus)
Aves GATSL2 36
  • 81.07 (n)
  • 91.54 (a)
tropical clawed frog
(Silurana tropicalis)
Amphibia gatsl1 36
  • 79.23 (n)
  • 92.4 (a)
zebrafish
(Danio rerio)
Actinopterygii gatsl2 36
  • 75.36 (n)
  • 84.05 (a)
Species with no ortholog for GATSL2:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for GATSL2 Gene

ENSEMBL:
Gene Tree for GATSL2 (if available)
TreeFam:
Gene Tree for GATSL2 (if available)

Paralogs for GATSL2 Gene

Selected SIMAP similar genes for GATSL2 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with GATSL2: view

No data available for Paralogs for GATSL2 Gene

Variants for GATSL2 Gene

Sequence variations from dbSNP and Humsavar for GATSL2 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type MAF
rs111690871 -- 75,025,849(+) ACTAA(A/G)CTGGT utr-variant-3-prime

Structural Variations from Database of Genomic Variants (DGV) for GATSL2 Gene

Variant ID Type Subtype PubMed ID
dgv2100e1 CNV Complex 17122850
nsv888381 CNV Gain 21882294
nsv528969 CNV Gain 19592680
dgv2101e1 CNV Complex 17122850
dgv2102e1 CNV Complex 17122850
essv14753 CNV CNV 17122850

Relevant External Links for GATSL2 Gene

HapMap Linkage Disequilibrium report
GATSL2

Disorders for GATSL2 Gene

No disorders were found for GATSL2 Gene.

No data available for UniProtKB/Swiss-Prot for GATSL2 Gene

Publications for GATSL2 Gene

  1. The DNA sequence of human chromosome 7. (PMID: 12853948) Hillier L.W. … Wilson R.K. (Nature 2003) 3 4
  2. Mass spectrometric analysis of lysine ubiquitylation reveals promiscuity at site level. (PMID: 21139048) Danielsen J.M. … Nielsen M.L. (Mol. Cell Proteomics 2011) 3
  3. Systematic and quantitative assessment of the ubiquitin-modified proteome. (PMID: 21906983) Kim W. … Gygi S.P. (Mol. Cell 2011) 3
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4
  5. Toward a complete human genome sequence. (PMID: 9847074) Sulston J.E. … Waterston R. (Genome Res. 1998) 3

Products for GATSL2 Gene

Sources for GATSL2 Gene

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