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Aliases for GAS8-AS1 Gene

Subcategory (RNA class) for GAS8-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for GAS8-AS1 Gene

  • GAS8 Antisense RNA 1 2 3 4
  • C16orf3 3 4 6
  • Chromosome 16 Open Reading Frame 3 2
  • Uncharacterized Protein C16orf3 3
  • GAS8 Antisense Gene Protein 1 4
  • EID1 6

External Ids for GAS8-AS1 Gene

Previous HGNC Symbols for GAS8-AS1 Gene

  • C16orf3

Summaries for GAS8-AS1 Gene

GeneCards Summary for GAS8-AS1 Gene

GAS8-AS1 (GAS8 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GAS8-AS1 Gene

Genomics for GAS8-AS1 Gene

Genomic Location for GAS8-AS1 Gene

Start:
90,028,908 bp from pter
End:
90,029,901 bp from pter
Size:
994 bases
Orientation:
Minus strand

Genomic View for GAS8-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for GAS8-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GAS8-AS1 Gene

No data available for Regulatory Elements for GAS8-AS1 Gene

Proteins for GAS8-AS1 Gene

  • Protein details for GAS8-AS1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    O95177-GAAS1_HUMAN
    Recommended name:
    Uncharacterized protein GAS8-AS1
    Protein Accession:
    O95177
    Secondary Accessions:
    • O95176
    • Q52LX9

    Protein attributes for GAS8-AS1 Gene

    Size:
    125 amino acids
    Molecular mass:
    12619 Da
    Quaternary structure:
    No Data Available

neXtProt entry for GAS8-AS1 Gene

Proteomics data for GAS8-AS1 Gene at MOPED

Post-translational modifications for GAS8-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GAS8-AS1 Gene

Domains for GAS8-AS1 Gene

Protein Domains for GAS8-AS1 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with GAS8-AS1: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GAS8-AS1 Gene

Function for GAS8-AS1 Gene

Gene Ontology (GO) - Molecular Function for GAS8-AS1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003674 molecular_function ND --
genes like me logo Genes that share ontologies with GAS8-AS1: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for GAS8-AS1 Gene

Localization for GAS8-AS1 Gene

Gene Ontology (GO) - Cellular Components for GAS8-AS1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005575 cellular_component ND --
genes like me logo Genes that share ontologies with GAS8-AS1: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Subcellular locations from COMPARTMENTS for GAS8-AS1 Gene

Pathways for GAS8-AS1 Gene

SuperPathways for GAS8-AS1 Gene

No Data Available

Interacting Proteins for GAS8-AS1 Gene

Gene Ontology (GO) - Biological Process for GAS8-AS1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0008150 biological_process ND --
genes like me logo Genes that share ontologies with GAS8-AS1: view

No data available for Pathways by source for GAS8-AS1 Gene

Transcripts for GAS8-AS1 Gene

mRNA/cDNA for GAS8-AS1 Gene

(5) Selected AceView cDNA sequences:
(1) REFSEQ mRNAs :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for GAS8-AS1

Primer Products

  • OriGene qSTAR qPCR primer pairs in human,mouse,rat for GAS8-AS1
  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for GAS8-AS1 Gene

No ASD Table

Relevant External Links for GAS8-AS1 Gene

GeneLoc Exon Structure for
GAS8-AS1
ECgene alternative splicing isoforms for
GAS8-AS1

Expression for GAS8-AS1 Gene

mRNA expression in normal human tissues for GAS8-AS1 Gene

genes like me logo Genes that share expressions with GAS8-AS1: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for GAS8-AS1 Gene

Orthologs for GAS8-AS1 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for GAS8-AS1 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C16orf3 36
  • 98 (a)
OneToOne
Species with no ortholog for GAS8-AS1:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for GAS8-AS1 Gene

ENSEMBL:
Gene Tree for GAS8-AS1 (if available)
TreeFam:
Gene Tree for GAS8-AS1 (if available)

Paralogs for GAS8-AS1 Gene

No data available for Paralogs for GAS8-AS1 Gene

Variants for GAS8-AS1 Gene

Polymorphic Variants from UniProtKB/Swiss-Prot for GAS8-AS1 Gene

O95177-GAAS1_HUMAN
There seems to be two alleles of this protein

Relevant External Links for GAS8-AS1 Gene

HapMap Linkage Disequilibrium report
GAS8-AS1

No data available for Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for GAS8-AS1 Gene

Disorders for GAS8-AS1 Gene

No disorders were found for GAS8-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for GAS8-AS1 Gene

Publications for GAS8-AS1 Gene

  1. Characterization and screening for mutations of the growth arrest- specific 11 (GAS11) and C16orf3 genes at 16q24.3 in breast cancer. (PMID: 9790751) Whitmore S.A. … Callen D.F. (Genomics 1998) 2 3 4
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  3. The sequence and analysis of duplication-rich human chromosome 16. (PMID: 15616553) Martin J. … Pennacchio L.A. (Nature 2004) 4
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for GAS8-AS1 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate GAS8-AS1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for GAS8-AS1
    • Block miRNA regulation of GAS8-AS1 using miScript Target Protectors

    Sources for GAS8-AS1 Gene

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