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Aliases for GAS8 Gene

Aliases for GAS8 Gene

  • Growth Arrest Specific 8 2 3 5
  • Growth Arrest-Specific Protein 11 3 4
  • GAS-11 3 4
  • GAS11 3 4
  • Growth Arrest-Specific 11 2
  • CILD33 3
  • GAS-8 4
  • DRC4 3

External Ids for GAS8 Gene

Previous HGNC Symbols for GAS8 Gene

  • GAS11

Previous GeneCards Identifiers for GAS8 Gene

  • GC16P091073
  • GC16P089787
  • GC16P089828
  • GC16P089831
  • GC16P088613
  • GC16P090089
  • GC16P075780

Summaries for GAS8 Gene

Entrez Gene Summary for GAS8 Gene

  • This gene includes 11 exons spanning 25 kb and maps to a region of chromosome 16 that is sometimes deleted in breast and prostrate cancer. The second intron contains an apparently intronless gene, C16orf3, that is transcribed in the opposite orientation. This gene is a putative tumor suppressor gene. Several transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Oct 2013]

GeneCards Summary for GAS8 Gene

GAS8 (Growth Arrest Specific 8) is a Protein Coding gene. Diseases associated with GAS8 include primary ciliary dyskinesia. Among its related pathways are Nanog in Mammalian ESC Pluripotency and Apoptotic Pathways in Synovial Fibroblasts. GO annotations related to this gene include Rab GTPase binding.

UniProtKB/Swiss-Prot for GAS8 Gene

  • Cytoskeletal linker which binds microtubules and probably functions in axonemal and non-axonemal dynein regulation. May play a role in the spermatozoa motility (By similarity).

No data available for Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GAS8 Gene

Genomics for GAS8 Gene

Regulatory Elements for GAS8 Gene

Enhancers for GAS8 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around GAS8 on UCSC Golden Path with GeneCards custom track

Promoters for GAS8 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around GAS8 on UCSC Golden Path with GeneCards custom track

Genomic Location for GAS8 Gene

Chromosome:
16
Start:
90,019,629 bp from pter
End:
90,044,975 bp from pter
Size:
25,347 bases
Orientation:
Plus strand

Genomic View for GAS8 Gene

Genes around GAS8 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GAS8 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GAS8 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for GAS8 Gene

Proteins for GAS8 Gene

  • Protein details for GAS8 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    O95995-GAS8_HUMAN
    Recommended name:
    Growth arrest-specific protein 8
    Protein Accession:
    O95995
    Secondary Accessions:
    • B2RCT1
    • B7Z4U1
    • G3V1L5
    • Q2M234

    Protein attributes for GAS8 Gene

    Size:
    478 amino acids
    Molecular mass:
    56356 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for GAS8 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for GAS8 Gene

Proteomics data for GAS8 Gene at MOPED

Post-translational modifications for GAS8 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for GAS8 Gene

Domains & Families for GAS8 Gene

Gene Families for GAS8 Gene

Protein Domains for GAS8 Gene

InterPro:
Blocks:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

O95995

UniProtKB/Swiss-Prot:

GAS8_HUMAN :
  • Belongs to the GAS8 family.
Family:
  • Belongs to the GAS8 family.
genes like me logo Genes that share domains with GAS8: view

Function for GAS8 Gene

Molecular function for GAS8 Gene

UniProtKB/Swiss-Prot Function:
Cytoskeletal linker which binds microtubules and probably functions in axonemal and non-axonemal dynein regulation. May play a role in the spermatozoa motility (By similarity).

Gene Ontology (GO) - Molecular Function for GAS8 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0017137 Rab GTPase binding IEA --
genes like me logo Genes that share ontologies with GAS8: view
genes like me logo Genes that share phenotypes with GAS8: view

Human Phenotype Ontology for GAS8 Gene

HPO Id HPO Name Alternative Ids Definition Synonyms

Animal Model Products

miRNA for GAS8 Gene

miRTarBase miRNAs that target GAS8

No data available for Enzyme Numbers (IUBMB) , Animal Models , Transcription Factor Targets and HOMER Transcription for GAS8 Gene

Localization for GAS8 Gene

Subcellular locations from UniProtKB/Swiss-Prot for GAS8 Gene

Cytoplasm, cytoskeleton. Cytoplasm, cytoskeleton, flagellum basal body. Golgi apparatus. Note=Associates with microtubules. Localized to the cytoplasm of round spermatids, the tails of elongating spermatids, and mature spermatid tail bundles protruding into the lumen, and in the flagellum of epididymal spermatozoa. {ECO:0000250}.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for GAS8 Gene COMPARTMENTS Subcellular localization image for GAS8 gene
Compartment Confidence
cytoskeleton 5
golgi apparatus 4
cytosol 3
nucleus 3
plasma membrane 2

Gene Ontology (GO) - Cellular Components for GAS8 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0031514 motile cilium IEA,ISS --
genes like me logo Genes that share ontologies with GAS8: view

Pathways & Interactions for GAS8 Gene

genes like me logo Genes that share pathways with GAS8: view

Gene Ontology (GO) - Biological Process for GAS8 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0008285 negative regulation of cell proliferation TAS 9790751
GO:0048870 cell motility IEA --
genes like me logo Genes that share ontologies with GAS8: view

No data available for SIGNOR curated interactions for GAS8 Gene

Drugs & Compounds for GAS8 Gene

No Compound Related Data Available

Transcripts for GAS8 Gene

Unigene Clusters for GAS8 Gene

Growth arrest-specific 8:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for GAS8 Gene

ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5a · 5b ^ 6a · 6b · 6c ^ 7a · 7b · 7c ^ 8 ^ 9 ^ 10a · 10b ^ 11a · 11b ^ 12 ^ 13a · 13b ^ 14a · 14b ^ 15a · 15b
SP1: - -
SP2: -
SP3: - -
SP4:
SP5: - - - - - -
SP6: -
SP7:
SP8:

Relevant External Links for GAS8 Gene

GeneLoc Exon Structure for
GAS8
ECgene alternative splicing isoforms for
GAS8

Expression for GAS8 Gene

mRNA expression in normal human tissues for GAS8 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Protein differential expression in normal tissues from HIPED for GAS8 Gene

This gene is overexpressed in Stomach (33.3) and Plasma (22.5).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MOPED, and MaxQB for GAS8 Gene



SOURCE GeneReport for Unigene cluster for GAS8 Gene Hs.431792

mRNA Expression by UniProt/SwissProt for GAS8 Gene

O95995-GAS8_HUMAN
Tissue specificity: Expressed in the heart, skeletal muscle, pancreas and liver. Weakly or not expressed in brain, placenta, lung and kidney.
genes like me logo Genes that share expression patterns with GAS8: view

Protein tissue co-expression partners for GAS8 Gene

- Elite partner

Primer Products

In Situ Assay Products

No data available for mRNA differential expression in normal tissues for GAS8 Gene

Orthologs for GAS8 Gene

This gene was present in the common ancestor of animals.

Orthologs for GAS8 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia GAS8 35
  • 88.01 (n)
  • 91.21 (a)
GAS8 36
  • 92 (a)
OneToOne
dog
(Canis familiaris)
Mammalia GAS8 35
  • 88.01 (n)
  • 93.51 (a)
GAS8 36
  • 92 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gas8 35
  • 86.82 (n)
  • 90.79 (a)
Gas8 16
Gas8 36
  • 91 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia GAS8 35
  • 98.4 (n)
  • 97.28 (a)
GAS8 36
  • 97 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Gas8 35
  • 86.61 (n)
  • 91.21 (a)
oppossum
(Monodelphis domestica)
Mammalia GAS8 36
  • 84 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia GAS8 36
  • 82 (a)
OneToOne
chicken
(Gallus gallus)
Aves GAS8 35
  • 75.76 (n)
  • 73.16 (a)
GAS8 36
  • 72 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia GAS8 36
  • 79 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia gas8 35
  • 71.98 (n)
  • 78.66 (a)
zebrafish
(Danio rerio)
Actinopterygii -- 35
gas8 35
  • 67.17 (n)
  • 65.15 (a)
gas8 36
  • 64 (a)
OneToOne
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP005850 35
  • 59.05 (n)
  • 43.12 (a)
fruit fly
(Drosophila melanogaster)
Insecta Gas8 35
  • 53.73 (n)
  • 43.04 (a)
Gas8 36
  • 43 (a)
OneToOne
sea squirt
(Ciona savignyi)
Ascidiacea CSA.4120 36
  • 69 (a)
OneToOne
Species with no ortholog for GAS8:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for GAS8 Gene

ENSEMBL:
Gene Tree for GAS8 (if available)
TreeFam:
Gene Tree for GAS8 (if available)

Paralogs for GAS8 Gene

(1) SIMAP similar genes for GAS8 Gene using alignment to 7 proteins:

genes like me logo Genes that share paralogs with GAS8: view

No data available for Paralogs for GAS8 Gene

Variants for GAS8 Gene

Sequence variations from dbSNP and Humsavar for GAS8 Gene

SNP ID Clin Chr 16 pos Sequence Context AA Info Type
rs868044 - 90,036,425(+) GGGAC(A/G)AACTC reference, missense
rs17178299 - 90,037,251(+) CATGC(A/G)GAAGA reference, missense
rs1751 -- 90,038,303(+) GCTCT(C/T)GTGTG intron-variant
rs4324129 -- 90,032,653(+) GTGTG(C/T)ACAGG intron-variant
rs4354938 -- 90,032,420(+) GTGTG(C/G)TATGG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for GAS8 Gene

Variant ID Type Subtype PubMed ID
nsv428331 CNV Gain+Loss 18775914
dgv3009n71 CNV Loss 21882294
nsv907429 CNV Loss 21882294
dgv3015n71 CNV Loss 21882294
nsv907445 CNV Loss 21882294
nsv457626 CNV Loss 19166990
nsv471119 CNV Loss 18288195
nsv482951 CNV Loss 15286789
nsv471120 CNV Gain 18288195
dgv3016n71 CNV Loss 21882294
dgv3017n71 CNV Loss 21882294
esv2676928 CNV Deletion 23128226
nsv509641 CNV Insertion 20534489
nsv1933 CNV Insertion 18451855

Variation tolerance for GAS8 Gene

Residual Variation Intolerance Score: 96.9% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 5.08; 68.99% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for GAS8 Gene

HapMap Linkage Disequilibrium report
GAS8
Human Gene Mutation Database (HGMD)
GAS8

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for GAS8 Gene

Disorders for GAS8 Gene

MalaCards: The human disease database

(1) MalaCards diseases for GAS8 Gene - From: DISEASES and GeneCards

Disorder Aliases PubMed IDs
primary ciliary dyskinesia
  • kartagener syndrome
- elite association - COSMIC cancer census association via MalaCards
Search GAS8 in MalaCards View complete list of genes associated with diseases

Relevant External Links for GAS8

Genetic Association Database (GAD)
GAS8
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
GAS8
genes like me logo Genes that share disorders with GAS8: view

No data available for UniProtKB/Swiss-Prot and Genatlas for GAS8 Gene

Publications for GAS8 Gene

  1. Characterization and screening for mutations of the growth arrest- specific 11 (GAS11) and C16orf3 genes at 16q24.3 in breast cancer. (PMID: 9790751) Whitmore S.A. … Callen D.F. (Genomics 1998) 2 3 4 23 67
  2. Isolation and properties of Gas8, a growth arrest-specific gene regulated during male gametogenesis to produce a protein associated with the sperm motility apparatus. (PMID: 11751847) Yeh S.D. … Lin-Chao S. (J. Biol. Chem. 2002) 3 23
  3. T lymphocyte-triggering factor of African trypanosomes is associated with the flagellar fraction of the cytoskeleton and represents a new family of proteins that are present in several divergent eukaryotes. (PMID: 10969087) Hill K.L. … Donelson J.E. (J. Biol. Chem. 2000) 3 23
  4. Panorama of ancient metazoan macromolecular complexes. (PMID: 26344197) Wan C. … Emili A. (Nature 2015) 3
  5. Loss-of-Function GAS8 Mutations Cause Primary Ciliary Dyskinesia and Disrupt the Nexin-Dynein Regulatory Complex. (PMID: 26387594) Olbrich H. … Omran H. (Am. J. Hum. Genet. 2015) 3

Products for GAS8 Gene

Sources for GAS8 Gene

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