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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

GALT Gene

protein-coding   GIFtS: 66
GCID: GC09P034636

galactose-1-phosphate uridylyltransferase

 Explore 23 diseases affiliated with
GALT via our new
 Human Malady Compendium 
Biological research products
for GALT
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Galactose-1-Phosphate Uridylyltransferase1 2
Gal-1-P Uridylyltransferase2 3
UDP-Glucose--Hexose-1-Phosphate Uridylyltransferase2 3
Galactose-1-Phosphate Uridyl Transferase2
EC 2.7.7.123

External Ids:    HGNC: 41351   Entrez Gene: 25922   Ensembl: ENSG000002139307   OMIM: 6069995   UniProtKB: P079023   

Export aliases for GALT gene to outside databases

Previous GC identifers: GC09P034958 GC09P034816


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for GALT:
Galactose-1-phosphate uridyl transferase (GALT) catalyzes the second step of the Leloir pathway of galactose
metabolism, namely the conversion of UDP-glucose + galactose-1-phosphate to glucose-1-phosphate + UDP-galactose. The
absence of this enzyme results in classic galactosemia in humans and can be fatal in the newborn period if lactose is
not removed from the diet. The pathophysiology of galactosemia has not been clearly defined. Two transcript variants
encoding different isoforms have been found for this gene. (provided by RefSeq, Apr 2012)

Gene Wiki entry for GALT (Galactoseâ€"1-phosphate uridylyltransferase)


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000009.11  NC_018920.1  NT_008413.18  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the GALT gene promoter:
         USF1   p53   AP-1   USF-1   ITF-2   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidGALT promoter sequence
   Search SABiosciences Chromatin IP Primers for GALT

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat GALT


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 9p13   Ensembl cytogenetic band:  9p13.3   HGNC cytogenetic band: 9p13

GALT Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
GALT gene location

GeneLoc information about chromosome 9         GeneLoc Exon Structure

GeneLoc location for GC09P034636:  view genomic region     (about GC identifiers)

Start:
34,638,130 bp from pter      End:
34,651,032 bp from pter
Size:
12,903 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: GALT_HUMAN, P07902 (See protein sequence)
Recommended Name: Galactose-1-phosphate uridylyltransferase  
Size: 379 amino acids; 43363 Da
Cofactor: Binds 1 iron ion per subunit (Potential)
Cofactor: Binds 1 zinc ion per subunit (Potential)
Subunit: Homodimer (Probable)
1 PDB 3D structure from and Proteopedia for GALT:
1R3A (3D)    
Secondary accessions: B4E097 E7ET32 Q14355 Q14356 Q14357 Q14358 Q14359 Q14360 Q14361 Q14363 Q14364
Q14365 Q14369 Q14370 Q14371 Q14372 Q14373 Q14374 Q14375 Q14377 Q14378 Q14380 Q14381 Q14382 Q14383
Q14384 Q14385 Q14386 Q14387 Q14389 Q16766 Q53XK1 Q5VZ81 Q96BY1
Alternative splicing: 2 isoforms:  P07902-1   P07902-2   (No experimental confirmation available)

Explore the universe of human proteins at neXtProt for GALT: NX_P07902

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_P07902

  • GALT Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins (2 alternative transcripts): 
    NP_000146.2  NP_001245261.1  

    ENSEMBL proteins: 
     ENSP00000451435   ENSP00000432839   ENSP00000368119   ENSP00000450942   ENSP00000450419  
     ENSP00000451756   ENSP00000401956  
    Reactome Protein details: P07902
    Human Recombinant Protein Products: 
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    Uscn Proteins for GALT

    Gene Ontology (GO): 3 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005625soluble fraction ----
    GO:0005794Golgi apparatus IDA--
    GO:0005829cytosol TAS--


    GALT for ontologies           About GeneDecksing



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    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    GALT for domains           About GeneDecksing

    5 InterPro domains/families:
     IPR001937 GalP_UDPtransf1
     IPR005849 GalP_Utransf_N
     IPR005850 GalP_Utransf_C
     IPR011146 HIT-like
     IPR019779 GalP_UDPtransf1_His-AS

    Graphical View of Domain Structure for InterPro Entry P07902

    ProtoNet protein and cluster: P07902

    1 Blocks protein family: IPB001937 Galactose-1-phosphate uridyl transferase

    UniProtKB/Swiss-Prot: GALT_HUMAN, P07902
    Similarity: Belongs to the galactose-1-phosphate uridylyltransferase type 1 family


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: GALT_HUMAN, P07902
    Catalytic activity: UDP-alpha-D-glucose + alpha-D-galactose 1-phosphate = alpha-D-glucose 1-phosphate +
    UDP-alpha-D-galactose
    Biophysicochemical properties: Kinetic parameters: KM=1.25 mM for alpha-D-galactose 1-phosphate (at pH 8.7); KM=0.43 mM
    for UDP-glucose (at pH 8.7); Vmax=48 umol/min/mg enzyme;

         Genatlas biochemistry entry for GALT:
    galactose-1-phosphate uridyltransferase

    Enzyme Number (IUBMB): EC 2.7.7.121

    miRNA
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    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat GALT
    4 QIAGEN miScript miRNA Assays for microRNAs that regulate GALT:
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    Browse SwitchGear 3'UTR luciferase reporter plasmids
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    Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0008108UDP-glucose:hexose-1-phosphate uridylyltransferase activity IEA--
    GO:0008270zinc ion binding IEA--


    GALT for ontologies           About GeneDecksing


    1 GenomeRNAi human phenotype for GALT:
     Upregulation of Wnt/beta-caten 

    Animal Models:
         Mouse knock-out Galttm1Sgl for GALT
         1 MGI mutant phenotype (inferred from 1 allele(MGI details for Galt):
     homeostasis/metabolism 

    GALT for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/6 super-pathways (see all 6About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Galactose metabolism
    Galactose metabolism1.00
    Galactose metabolism0.47
    Galactose metabolism0.95
    2Metabolism
    Metabolism1.00
    Metabolic pathways0.38
    3galactose degradation I (Leloir pathway)
    galactose degradation I (Leloir pathway)1.00
    Galactose catabolism0.50
    4Amino sugar and nucleotide sugar metabolism
    Amino sugar and nucleotide sugar metabolism1.00
    5MPS IIIC - Sanfilippo syndrome C
    Metabolism of carbohydrates0.47

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    1 EMD Millipore Pathway for GALT
        Galactose metabolism


    1 GeneGo (Thomson Reuters) Pathway for GALT
        Galactose metabolism

    2 BioSystems Pathways for GALT 
        galactose degradation I (Leloir pathway)
    colanic acid building blocks biosynthesis

    3        Reactome Pathways for GALT
        Metabolism of carbohydrates
    Galactose catabolism
    Metabolism


    3         Kegg Pathways  (Kegg details for GALT):
        Galactose metabolism
    Amino sugar and nucleotide sugar metabolism
    Metabolic pathways

    UniProtKB/Swiss-Prot: GALT_HUMAN, P07902
    Pathway: Carbohydrate metabolism; galactose metabolism


    GALT for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for GALT

    STRING Interaction Network Preview (showing 5 interactants - click image to see 14)

    5/88 Interacting proteins for GALT (P079023 ENSP000003681194) via UniProtKB, MINT, STRING, and/or I2D (see all 88)

    InteractantInteraction Details
    GeneCardExternal ID(s)
    BLMHQ138673, ENSP000002617144I2D: score=1 STRING: ENSP00000261714
    UGP2Q168513, ENSP000003387034I2D: score=1 STRING: ENSP00000338703
    GALK2Q014153, ENSP000003797664I2D: score=2 STRING: ENSP00000379766
    TRIP13Q156453, ENSP000001663454I2D: score=4 STRING: ENSP00000166345
    PHGDHO431753I2D: score=5 
    About this table

    Gene Ontology (GO): 5 biological process terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005975carbohydrate metabolic process TAS--
    GO:0006012galactose metabolic process TAS1427861
    GO:0006258UDP-glucose catabolic process IEA--
    GO:0019388galactose catabolic process TAS--
    GO:0044281small molecule metabolic process TAS--


    GALT for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    GALT for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for GALT

    5 HMDB Compounds for GALT    About this table
    CompoundSynonyms CAS #PubMed Ids
    Galactose 1-phosphate1-(dihydrogen phosphate) Galactitol (see all 14)2255-14-3--
    Glucose 1-phosphateCori ester (see all 22)59-56-3--
    IronArmco iron (see all 19)7439-89-6--
    Uridine diphosphate glucose(UPD)-glucose (see all 24)133-89-1--
    Uridine diphosphategalactoseGDU (see all 39)2956-16-3--
    10/28 Novoseek chemical compound relationships for GALT gene (see all 28)    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    galactose-1-phosphate 98 189 8836578 (3), 11152465 (3), 1931160 (2), 17486650 (2) (see all 99)
    galactose 89.3 159 11152465 (5), 20075179 (4), 11936817 (4), 7671974 (3) (see all 73)
    udpglucose 84.4 44 16125333 (3), 20359473 (3), 15862277 (2), 16260165 (2) (see all 18)
    mannitol 60 6 10535394 (1), 11092512 (1), 12595586 (1), 18428423 (1) (see all 6)
    gluconate 59.8 3 9826225 (1), 9396569 (1), 14680973 (1)
    lactose 55.1 5 7671974 (1), 11936817 (1), 18454942 (1), 12370157 (1)
    asparagine 45.2 6 7671959 (1), 11936817 (1), 8198125 (1), 15835923 (1)
    ribose 32.2 2 12468275 (1)
    arginine 23.8 5 7671959 (1), 10037750 (1), 8598637 (1), 7927329 (1)
    n-acetylglucosamine 23.8 2 9011380 (1), 11485999 (1)

    Search CenterWatch for drugs/clinical trials and news about GALT 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for GALT gene (2 alternative transcripts): 
    NM_000155.3  NM_001258332.1  

    Unigene Cluster for GALT:

    Galactose-1-phosphate uridylyltransferase
    Hs.522090  [show with all ESTs]
    Unigene Representative Sequence: NM_000155
    18/28 Ensembl transcripts including schematic representations, and UCSC links where relevant (see all 28):
    ENST00000465543 ENST00000468099 ENST00000554550 ENST00000473506 ENST00000557541
    ENST00000554139 ENST00000473529 ENST00000378842(uc003zve.3 uc003zvf.3)
    ENST00000472111 ENST00000554897 ENST00000554944 ENST00000555020 ENST00000489643
    ENST00000554085 ENST00000487381 ENST00000554638 ENST00000555214 ENST00000556403


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    Additional cDNA sequence: 

    AK300070.1 AK303279.1 AK314340.1 BC015045.2 BT009852.1 M60091.1 

    24/30 DOTS entries (see all 30):

    DT.416078  DT.97861985  DT.100818551  DT.40255414  DT.97861990  DT.437477  DT.100803373  DT.100818556 
    DT.121165496  DT.95246637  DT.100818549  DT.95246626  DT.121165438  DT.100766052  DT.100818557  DT.121165523 
    DT.100790062  DT.100818554  DT.121165542  DT.95246636  DT.100818548  DT.97793409  DT.100790054  DT.121165415 

    2 AceView cDNA sequences:

    AA357883 AI865549 

    GeneLoc Exon Structure


    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    GALT expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: GTTGGCTACG

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image
    See GALT Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for GALT

    SOURCE GeneReport for Unigene cluster: Hs.522090
        SABiosciences Custom PCR Arrays for GALT
    Primer
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    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for GALT

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the last universal common ancestor (LUCA).

    Orthologs for GALT gene from 11/30 species (see all 30)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Galt1 , 5 galactose-1-phosphate uridyl transferase1, 5 87.09(n)1
    91.64(a)1
      4 (22.07 cM)5
    144301  NM_016658.21  NP_057867.21 
     417552285 
    chicken
    (Gallus gallus)
    Aves GALT1 galactose-1-phosphate uridylyltransferase 72.5(n)
    74.86(a)
      431509  XM_429060.3  XP_429060.3 
    lizard
    (Anolis carolinensis)
    Reptilia GALT6
    --
    72(a)
    1 ↔ 1
    GL343305.1(72565-97528)
    African clawed frog
    (Xenopus laevis)
    Amphibia Xl.150332 Xenopus laevis transcribed sequence with weak similarity more 78.28(n)    BJ031226.1 
    zebrafish
    (Danio rerio)
    Actinopterygii galt1 galactose-1-phosphate uridylyltransferase 67.82(n)
    71.92(a)
      791130  NM_001080612.1  NP_001074081.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta CG92323
    Galt1
    UTP-galactose-1-phosphate
    uridylyltransferase3
    Galactose-1-phosphate uridylyltransferase1
    57(a)3
    59.77(n)1
    58.31(a)1
      26F53
    339351  NM_135218.21  NP_609062.21 
    worm
    (Caenorhabditis elegans)
    Secernentea ZK1058.31 , 3 galactose-1-phosphate uridylyltransferase3
    Protein ZK1058.31
    49(a)3
    53.95(n)1
    51.35(a)1
      III(3990677-3992442)3
    1755061  NM_065388.31  NP_497789.11 
    baker's yeast
    (Saccharomyces cerevisiae)
    Saccharomycetes GAL7(YBR018C)4
    GAL71
    Galactose-1-phosphate uridyl transferase, synthesizes more4
    Gal7p1
    52.14(n)1
    48.25(a)1
      2(275527-274427)4
    8523061, 4  NP_009574.11, 4 
    thale cress
    (Arabidopsis thaliana)
    eudicotyledons AT5G182006
    galactose-1-phosphate uridylyltransferase
    20(a)
    1 ↔ 1
    5(6015225-6016782)
    rice
    (Oryza sativa)
    Liliopsida --
    galactose-1-phosphate uridyl transferase, putative...
    23(a)
    1 ↔ 1
    7(3761247-3765454)


    ENSEMBL Gene Tree for GALT (if available)
    TreeFam Gene Tree for GALT (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
      --

    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/313 NCBI SNPs in GALT are shown (see all 313    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 9 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs18004611,2
    Cnon-pathogenic34647187(+) AGCTTC/ATGAAG 3 /M /L mis1 ut511Minor allele frequency- A:0.00NA 2
    rs412748651,2
    C,F,non-pathogenic34647802(+) TCTCGG/CTTATC 2 -- int12Minor allele frequency- C:0.05NA EU 1444
    rs412748671,2
    C,F,non-pathogenic34648088(+) TAACAG/AAGCTC 2 -- int12Minor allele frequency- A:0.05NA EU 1420
    rs120004811,2
    C,F,A,H,non-pathogenic34648095(+) GCTCCG/ATATCC 2 -- int17Minor allele frequency- A:0.03NS EA NA WA 544
    rs10556071,2
    C,F,H,non-pathogenic34649050(+) GAGACG/ATCCTT 4 /T syn120Minor allele frequency- A:0.04NS EA NA CSA WA EU 7594
    rs617359821,2
    C,F,non-pathogenic34649447(+) AACCAT/CTGGCA 4 /H syn16Minor allele frequency- C:0.03NS CSA WA NA EU 6066
    rs1110336471,2
    Cpathogenic34647133(+) TGCTGA/G/TTGTCA 5 M V L mis1 ut510--------
    rs1110336481,2
    Cpathogenic34647155(+) GAAGCA/G/TGCCCT 5 Q R L ut51 mis10--------
    rs1110336631,2
    Cpathogenic34647224(+) CCCTCC/TGTGTC 4 R C P L mis10--------
    rs1110336901,2
    C,F,pathogenic34647855(+) CTGGTC/G/TGGATG 6 S W L mis11NA 4552

    HapMap Linkage Disequilibrium report for GALT (34638130 - 34651032 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 2 variations for GALT
         2 CNVs: 9615 6686
    Human Gene Mutation Database (HGMD): GALT

    Locus Specific Mutation Databases (LSDB): GALT

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing GALT
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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    GALT for disorders           About GeneDecksing

    OMIM gene information: 606999   
    OMIM disorders: 230400  
    UniProtKB/Swiss-Prot: GALT_HUMAN, P07902
  • Defects in GALT are the cause of galactosemia (GALCT) [MIM:230400]. Galactosemia is an inherited disorder of
  • galactose metabolism that causes jaundice, cataracts, and mental retardation

    20/23 diseases for GALT (see all 23):    About MalaCards
    mayer-rokitansky-kuster-hauser syndrome    rokitansky-kuster-hauser syndrome    galactosemia    lens subluxation
    galactokinase deficiency    premature ovarian failure    metabolic disorders    cataract
    jaundice    endometriosis    myopia    hypogonadism
    ovarian cancer    genetic disease    hypotonia    hepatitis b
    hepatoblastoma    diarrhea    vaginitis    infertility

    2 diseases from the University of Copenhagen DISEASES database for GALT:
    Galactosemia     Premature ovarian failure

    10/17 Novoseek disease relationships for GALT gene (see all 17)    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    galactosemias 98.3 125 16540753 (4), 10649501 (3), 7671974 (3), 8421669 (3) (see all 79)
    classical galactosemia 96.8 18 9222760 (2), 9766850 (2), 10408771 (2), 7671959 (1) (see all 14)
    dyspraxia verbal 88.5 2 12595586 (1), 7671960 (1)
    gale deficiency 82.5 2 14970742 (1), 11001796 (1)
    galactokinase deficiency 73.3 2 12705493 (1)
    ovarian failure premature 72.3 5 11113841 (1), 15202737 (1), 18089596 (1), 8405535 (1) (see all 5)
    ovarian dysfunction 57 1 7671960 (1)
    cataract 52.9 16 14707519 (5), 18454942 (4), 8741038 (1), 8336207 (1) (see all 9)
    hepatomegaly 51 2 8598637 (1), 8326330 (1)
    developmental delay 40.7 1 7671974 (1)

    Genatlas disease: GALT
    galactosemia,type I,characterized by feeding difficulties, vomiting,lethargy,diarrhea,jaundice,hepatomegaly,failure to
    thrive and cataract with high levels of galactose and galactitol in urine despite dietary restriction,developmental
    delay,ovarian failure and other neurological and psychological abnormalities are common

    GeneTests: GALT
    Galactosemia

    Genetic Association Database (GAD): GALT
    Human Genome Epidemiology (HuGE) Navigator: GALT (27 documents)

    Export disorders for GALT gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for GALT gene, integrated from 9 sources (see all 222):
    (articles sorted by number of sources associating them with GALT)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Mutations at the galactose-1-p-uridyltransferase gene in infants with a positive galactosemia newborn screening test. (PubMed id 11919338)1, 2, 4, 9 Item C....Strobl W. (2002)
    2. Galactosemia: a strategy to identify new biochemical phenotypes and molecular genotypes. (PubMed id 7887416)1, 2, 9 Elsas L.J.... Dembure P.P. (1995)
    3. Galactose-1-phosphate uridyl transferase (GALT) genotype and phenotype, galactose consumption, and the risk of borderline and invasive ovarian cancer (United States). (PubMed id 11936817)1, 4, 9 Cozen W....Pike M.C. (2002)
    4. Classical galactosemia and mutations at the galactose-1-phosphate uridyl transferase 'GALT' gene. (PubMed id 10408771)1, 2, 9 Tyfield L.... Boleda M.D. (1999)
    5. On the molecular nature of the Duarte variant of galactose-1- phosphate uridyl transferase (GALT). (PubMed id 8112740)1, 2, 9 Lin H.-C.... Reichardt J.K.V. (1994)
    6. Association of galactose-1-phosphate uridyltransferase activity and N314D genotype with the risk of ovarian cancer. (PubMed id 12370157)1, 4, 9 Goodman M.T....Ng W.G. (2002)
    7. Endometriosis is not associated with or linked to the GALT gene. (PubMed id 11704127)1, 4, 9 Stefansson H....Stefansson K. (2001)
    8. Identification of mutations in the galactose-1-phosphate uridyltransferase (GALT) gene in 16 Turkish patients with galactosemia, including a novel mutation of F294Y. (PubMed id 10220154)1, 2, 9 Seyrantepe V.... Reichardt J.K.V. (1999)
    9. Molecular basis of galactosemia: mutations and polymorphisms in the gene encoding human galactose-1-phosphate uridylyltransferase. (PubMed id 2011574)1, 2, 9 Reichardt J.K.V. and Woo S.L.C. (1991)
    10. Combination of enzyme analysis, allele-specific PCR and sequencing to detect mutations in the GALT gene. (PubMed id 17876724)1, 2, 9 Calderon F.R....Mao R. (2007)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
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      Query String
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    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 2592 HGNC: 4135 AceView: GALT.2 Ensembl:ENSG00000213930 euGenes: HUgn2592
    ECgene: GALT Kegg: 2592 H-InvDB: GALT

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for GALT Pharmacogenomics, SNPs, Pathways
    Galactose-1-Phosphate Uridyl Transferase (GALT)http://arup.utah.edu/database/GALT/GALT_welcome.php
    GeneReviewshttp://www.ncbi.nlm.nih.gov/sites/GeneTests/lab/gene/GALT

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for GALT gene:
    Search GeneIP for patents involving GALT

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