Free for academic non-profit institutions. Other users need a Commercial license

Aliases for GAGE2C Gene

Aliases for GAGE2C Gene

  • G Antigen 2C 2 3 4
  • Cancer/Testis Antigen 4.2 3 4
  • GAGE-2C 3 4
  • CT4.2 3 4
  • GAGE2 3 4
  • G Antigen 2B/2C 3
  • GAGE2B GAGE2C 4
  • G Antigen 2 3
  • GAGE-2B 4
  • GAGE-2 3

External Ids for GAGE2C Gene

Previous GeneCards Identifiers for GAGE2C Gene

  • GC0XP049118
  • GC0XP049090
  • GC0XP049119
  • GC0XP049218
  • GC0XP049226
  • GC0XP049333

Summaries for GAGE2C Gene

Entrez Gene Summary for GAGE2C Gene

  • This gene belongs to a family of genes that are expressed in a variety of tumors but not in normal tissues, except for the testis. The sequences of the family members are highly related but differ by scattered nucleotide substitutions. The antigenic peptide YRPRPRRY, which is also encoded by several other family members, is recognized by autologous cytolytic T lymphocytes. [provided by RefSeq, Jul 2008]

GeneCards Summary for GAGE2C Gene

GAGE2C (G Antigen 2C) is a Protein Coding gene. An important paralog of this gene is GAGE2E.

UniProtKB/Swiss-Prot for GAGE2C Gene

  • Antigen, recognized on melanoma by autologous cytolytic T-lymphocytes.

No data available for CIViC summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GAGE2C Gene

Genomics for GAGE2C Gene

Genomic Location for GAGE2C Gene

Chromosome:
X
Orientation:
Unknown strand

Genomic View for GAGE2C Gene


Cytogenetic band:
GeneLoc Logo Gene Density

No data available for Regulatory Elements and RefSeq DNA sequence for GAGE2C Gene

Proteins for GAGE2C Gene

  • Protein details for GAGE2C Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q13066-GAG2B_HUMAN
    Recommended name:
    G antigen 2B/2C
    Protein Accession:
    Q13066
    Secondary Accessions:
    • C9K0W9
    • Q4V322

    Protein attributes for GAGE2C Gene

    Size:
    116 amino acids
    Molecular mass:
    12786 Da
    Quaternary structure:
    No Data Available
    Miscellaneous:
    • This gene belongs to a family of genes organized in clustered repeats. They have a high degree of predicted sequence identity, but differ by scattered single nucleotide substitution. Their sequences contain either the antigenic peptide YYWPRPRRY or YRPRPRRY which is recognized by cytotoxic T-cells.

neXtProt entry for GAGE2C Gene

Post-translational modifications for GAGE2C Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for GAGE2C Gene

REFSEQ proteins:

No data available for DME Specific Peptides for GAGE2C Gene

Domains & Families for GAGE2C Gene

Protein Domains for GAGE2C Gene

InterPro:
Blocks:
ProtoNet:

Suggested Antigen Peptide Sequences for GAGE2C Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q13066

UniProtKB/Swiss-Prot:

GAG2B_HUMAN :
  • Belongs to the GAGE family.
Family:
  • Belongs to the GAGE family.
genes like me logo Genes that share domains with GAGE2C: view

No data available for Gene Families for GAGE2C Gene

Function for GAGE2C Gene

Molecular function for GAGE2C Gene

UniProtKB/Swiss-Prot Function:
Antigen, recognized on melanoma by autologous cytolytic T-lymphocytes.

Gene Ontology (GO) - Molecular Function for GAGE2C Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003674 molecular_function ND --
genes like me logo Genes that share ontologies with GAGE2C: view
genes like me logo Genes that share phenotypes with GAGE2C: view

Animal Model Products

CRISPR Products

miRNA for GAGE2C Gene

miRTarBase miRNAs that target GAGE2C

Inhibitory RNA Products

Clone Products

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for GAGE2C Gene

Localization for GAGE2C Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for GAGE2C gene
Compartment Confidence
nucleus 3
extracellular 1
mitochondrion 1
cytosol 1

Gene Ontology (GO) - Cellular Components for GAGE2C Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005575 cellular_component ND --
genes like me logo Genes that share ontologies with GAGE2C: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot for GAGE2C Gene

Pathways & Interactions for GAGE2C Gene

SuperPathways for GAGE2C Gene

No Data Available

Interacting Proteins for GAGE2C Gene

Selected Interacting proteins: Q13066-GAG2B_HUMAN for GAGE2C Gene via UniProtKB

Gene Ontology (GO) - Biological Process for GAGE2C Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0008150 biological_process ND --
genes like me logo Genes that share ontologies with GAGE2C: view

No data available for Pathways by source and SIGNOR curated interactions for GAGE2C Gene

Drugs & Compounds for GAGE2C Gene

No Compound Related Data Available

Transcripts for GAGE2C Gene

Unigene Clusters for GAGE2C Gene

G antigen 2C:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GAGE2C Gene

No ASD Table

Relevant External Links for GAGE2C Gene

ECgene alternative splicing isoforms for
GAGE2C

Expression for GAGE2C Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for GAGE2C Gene

mRNA differential expression in normal tissues according to GTEx for GAGE2C Gene

This gene is overexpressed in Testis (x51.7).

NURSA nuclear receptor signaling pathways regulating expression of GAGE2C Gene:

GAGE2C

SOURCE GeneReport for Unigene cluster for GAGE2C Gene:

Hs.460641

mRNA Expression by UniProt/SwissProt for GAGE2C Gene:

Q13066-GAG2B_HUMAN
Tissue specificity: Expressed in a variety of tumor tissues but not in normal tissues, except testis.
genes like me logo Genes that share expression patterns with GAGE2C: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GAGE2C Gene

Orthologs for GAGE2C Gene

No data available for Orthologs and Evolution for GAGE2C Gene

Paralogs for GAGE2C Gene

Paralogs for GAGE2C Gene

genes like me logo Genes that share paralogs with GAGE2C: view

Variants for GAGE2C Gene

Structural Variations from Database of Genomic Variants (DGV) for GAGE2C Gene

Variant ID Type Subtype PubMed ID
dgv4237n106 CNV duplication 24896259
esv28941 CNV gain+loss 19812545
esv3327960 CNV duplication 20981092
esv3364710 CNV duplication 20981092
esv3392575 CNV duplication 20981092
esv3407218 CNV duplication 20981092
nsv1075727 CNV deletion 25765185
nsv1153207 CNV duplication 26484159
nsv515203 CNV gain 21397061
nsv6899 CNV insertion 18451855
nsv6900 CNV deletion 18451855
nsv820429 CNV deletion 20802225
nsv953412 CNV duplication 24416366

Relevant External Links for GAGE2C Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
GAGE2C

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Variation tolerance for GAGE2C Gene

Disorders for GAGE2C Gene

Relevant External Links for GAGE2C

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
GAGE2C

No disorders were found for GAGE2C Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for GAGE2C Gene

Publications for GAGE2C Gene

  1. An overview of the GAGE cancer/testis antigen family with the inclusion of newly identified members. (PMID: 18179644) Gjerstorff M.F. … Ditzel H.J. (Tissue Antigens 2008) 3 4 64
  2. The DNA sequence of the human X chromosome. (PMID: 15772651) Ross M.T. … Bentley D.R. (Nature 2005) 3 4 64
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4 64
  4. A new family of genes coding for an antigen recognized by autologous cytolytic T lymphocytes on a human melanoma. (PMID: 7544395) van den Eynde B. … Boon T. (J. Exp. Med. 1995) 3 4 64
  5. Combinatorial pharmacologic approaches target EZH2-mediated gene repression in breast cancer cells. (PMID: 19934278) Sun F. … Yu Q. (Mol. Cancer Ther. 2009) 3 64

Products for GAGE2C Gene

Sources for GAGE2C Gene

Content
Loading form....