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GAB4 Gene

protein-coding   GIFtS: 32

GC22M015822
GRB2-associated binding protein family, member 4
Symbol approved by the HUGO Gene Nomenclature Committee (HGNC) database
Services    
(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc , and/or 7Ensembl, 8miRBase)
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Aliases
GAB2-like 2, 3
OTTHUMP00000195887 2
Descriptions
GRB2-associated binder 2-like 3
GRB2-associated binder 2-like protein 2
GRB2-associated binder 4 3
GRB2-associated binding protein family, member 4 2
GRB2-associated-binding protein 2-like 3
Growth factor receptor bound protein 2-associated protein 4 3
External Ids
HGNC: 183251
Entrez Gene: 1289542
UniProtKB: Q2WGN93
Ensembl: ENSG000002155687
Search outside databases for aliases for GAB4 gene

Previous GC identifer: GC22U900278

(According to Entrez Gene, Wikipedia's Gene Wiki,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
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  --
(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to UCSC and Ensembl, Transcription factor binding sites according to SABiosciences)
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Genomic View:
UCSC Golden Path with GeneCards custom track

 Transcription factor binding sites upstream to the GAB4 gene  

Entrez Gene cytogenetic band: 22q11.1   Ensembl cytogenetic band:  22q11.1   HGNC cytogenetic band: 22q11.2

GAB4 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)

GeneLoc gene densities for chromosome 22         GeneLoc Exon Structure

GeneLoc location for GC22M015822:     (about GC identifiers)

Start:
15,822,826 bp from pter
End:
15,869,112 bp from pter
Size:
46,287 bases
Orientation:
minus strand
RefSeq DNA sequence:
NC_000022.9  NT_011519.10  
(According to 1UniProtKB, and/or Ensembl, Phosphorylation sites according to 2Phosphosite, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Enzo Life Sciences, Abnova, OriGene and/or, Abcam,
Biochemical Assays by Invitrogen, Millipore, R&D Systems, Cell Signaling Technology, and/or Enzo Life Sciences, Ontologies according to Gene Ontology Consortium 01 Apr 2009 and Entrez Gene, Antibodies by Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Cell Signaling Technology, Abcam, Abnova, and/or Novus Biologicals)
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UniProtKB/Swiss-Prot: GAB4_HUMAN, Q2WGN9 (See protein sequence)
Recommended Name: GRB2-associated-binding protein 4  
Size: 574 amino acids; 62367 Da

REFSEQ proteins: NP_001032903.1  

ENSEMBL proteins: 
ENSP00000383431 


Human Recombinant Proteins 
Browse Drug Discovery Central at Invitrogen for human recombinant proteins
Browse Purified and Recombinant Proteins at Millipore
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Browse recombinant and purified proteins available from Enzo Life Sciences
Browse Abcam for Recombinant Proteins
Browse Abnova for Human Recombinant Proteins
                Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 


Antibodies for GAB4: 
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Browse Antibodies at Sigma-Aldrich
Browse R&D Systems for Antibodies
Search for antibodies at Abcam and the World's Antibody Gateway (free search engine of over 150 antibody companies)
Browse Abnova for Monoclonal and Polyclonal Antibodies
Search Novus for antibodies for GAB4

Assays for GAB4: 
Browse Invitrogen for biochemical assays
Browse Kits and Assays available from Millipore
Browse R&D Systems for biochemical assays
Browse biochemical assays available from Enzo Life Sciences

(According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
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2 InterPro domains/families:
 IPR001849 Pleckstrin_homology
 IPR011993 PH_type


   GeneDecks  GAB4 for the domains selected above  
About GeneDecksing

Graphical View of Domain Structure for InterPro Entry Q2WGN9

ProtoNet protein and cluster: Q2WGN9

UniProtKB/Swiss-Prot: GAB4_HUMAN, Q2WGN9
Similarity: Belongs to the GAB family
Similarity: Contains 1 PH domain

(According to MGI Jun 06 2009, UniProtKB, IUBMB,and/or Genatlas,
shRNA from OriGene, Sigma-Aldrich, RNAi from Sigma-Aldrich,
RNAi Products, Clones, and Q-PCR Products from Invitrogen, Millipore, OriGene, and/or Abnova, siRNAs from Applied Biosystems, SYBR primers from OriGene, Cell-based Assays from Millipore, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
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Inhib.
RNA:
Browse Invitrogen for RNAi
Browse for Gene Knock-down Tools from Millipore
Browse Abnova for Chimera RNAi Products
              OriGene 29mer shRNA kit in GFP-retroviral vector: NM_001037814

              Applied Biosystems Silencer® siRNAs for GAB4

              Sigma-Aldrich siRNA for GAB4  
                     Sigma-Aldrich shRNA for GAB4  
                     Explore Sigma-Aldrich super-pooled esiRNAs  

Clones:Browse Clone Ranger at Invitrogen for clones
Browse Clones for the Expression of Recombinant Proteins Available from Millipore
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_001037814
                                 Myc/DDK tagged cDNA clone in CMV expression vector: NM_001037814
                                 untagged cDNA clone in CMV expression vector: NM_001037814 

Primers: Browse Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers
              OriGene genome-wide validated SYBR primer pairs: NM_001037814

(Pathways according to Invitrogen (maps by GeneGo), Millipore, Cell Signaling Technology, Sigma-Aldrich, KEGG and/or UniProtKB,
Sets of similar genes according to GeneDecks, Proteins Network according to SABiosciences, Interactions according to 1UniProtKB, 2MINT, and/or 3STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
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  --
(Chemical Compounds according to UniProtKB, Enzo Life Sciences, Sigma-Aldrich, Tocris Bioscience, and/or Novoseek and Drugs according to Enzo Life Sciences and/or PharmGKB)
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Browse drugs & compounds from Enzo Life Sciences
Browse Small Molecules at Sigma-Aldrich

Browse Tocris compounds for GAB4

(GenBank/EMBL/DDBJ Accessions according to
Unigene (Build 219 Homo sapiens; Jun 2 2009) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or AceView,
non coding RNAs according to RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
RNAi Products from Invitrogen, Millipore, and/or Abnova,
siRNAs from Applied Biosystems, Sigma-Aldrich,
shRNA from Sigma-Aldrich, OriGene,
Tagged/untagged cDNA clones from OriGene,
Expression Assays from Applied Biosystems)
About This Section

Inhib.
RNA:
Browse Invitrogen for RNAi
Browse for Gene Knock-down Tools from Millipore
Browse Abnova for Chimera RNAi Products
              OriGene 29mer shRNA kit in GFP-retroviral vector: NM_001037814

              Sigma-Aldrich siRNA for GAB4  
                     Sigma-Aldrich shRNA for GAB4  
                     Explore Sigma-Aldrich super-pooled esiRNAs  

Applied Biosystems Silencer® siRNAs: 

NM_001037814  

REFSEQ mRNAs for GAB4 gene: 

NM_001037814.1   

Applied Biosystems TaqMan ® Gene Expression Assays: 

NM_001037814  

              OriGene GFP tagged cDNA clone in CMV expression vector: NM_001037814
                                 Myc/DDK tagged cDNA clone in CMV expression vector: NM_001037814
                                 untagged cDNA clone in CMV expression vector: NM_001037814 

Additional cDNA sequence: 

AB076978.1 AK057252.1 

2 DOTS entries:

DT.120644072  DT.95313461 

highest scoring ESTs for GAB4:

AB076978 AK057252 AA709102 DB020144 DB029178 DB043501 DB047959 DB094011 DB335769 H55641 

Unigene Cluster for GAB4:

GRB2-associated binding protein family, member 4
Hs.434113  [show with all ESTs]
Unigene Representative Sequence: AK057252


GeneLoc Exon Structure

1 Ensembl transcript including schematic representation:
ENST00000400588  
(Experimental results according to 1GeneNote and GNF BioGPS,
probe sets-to-genes annotations according to 2GeneAnnot , 3GeneTide , Sets of similar genes according to GeneDecks, Electronic Northern calculations according to data from UniGene (Build 219 Homo sapiens), SAGE tags according to CGAP, plus additional links to SOURCE, and/or GNF BioGPS, and/or EXPOLDB, and/or UniProtKB,
Expression Assays from Applied Biosystems )
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GAB4 expression in normal and diseased human tissues

 Applied Biosystems TaqMan ® Gene Expression Assays for GAB4

1 / 2

1 probe-set matching GAB4 gene


Affymetrix
probe-set
Array  GeneAnnot data GeneNote data GeneTide data
# genes Sensitivity Specificity Correlation Length Gb_Accession Consensus Uniqueness Score Rank

1563816_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --
About this table
Data from (Publications) and GNF BioGPS
    About these images
About these images

CGAP SAGE TAG: AAGACGAACA

SOURCE GeneReport for Unigene cluster: Hs.434113
(Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD and/or 5MGI Jun 06 2009, with possible further links to Flybase and/or WormBase, Gene Trees according to Ensembl)
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Orthologs for GAB4 gene from 1 species
Organism Gene Locus Description Human
Similarity
NCBI accessions
chimpanzee
(Pan troglodytes)
GAB41   -- GRB2-associated binding protein family, member 4 94.14(n)
92.13(a)
470133  XM_525517.2  XP_525517.2 
About this table        Species with no ortholog for GAB4

ENSEMBL Gene Tree for GAB4
(Paralogs according to 1HomoloGene
and 2Ensembl, Pseudogenes according to 3Pseudogene.org)
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Paralogs for GAB4 gene
GAB12  GAB32  GAB22  

(According to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, and UniProtKB, Linkage Disequilibrium by HapMap, Genotyping Reagents from Applied Biosystems)
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10/304 NCBI SNPs in GAB4 are shown (see all 304 )
(Click for Applied Biosystems TaqMan ® Genotyping Assay)  (see all 146)
ABGenomic DataTranscription DataAllele Frequencies
SNP IDValidChr 22 posSequenceRecsAA
Chg
TypeMoreRecsAllele
freq
PopTotal
sample
More
------------
rs10247321,2
A,C,F,H,O15823381(+) AGCCCA/GGGTCT 1 -- ut319Minor allele frequency- N:0.01EU EA WA NA 810
rs10247311,2
A,C,F,H,O15823238(+) CCATGA/TCCACT 1 -- ut3112Minor allele frequency- N:0.00EU EA WA NA 1050
rs59941281,2
A,C,F,H15870932(+) CAGATG/AAGGTC 1 -- ng3112Minor allele frequency- A:0.28EU EA WA NA 1162
rs110893871,2
A,C,F,H15822739(+) AGCCAT/CCTCCA 1 -- ng517Minor allele frequency- C:0.39NA EU EA WA 558
rs57469611,2
A,C,F,H15869546(+) GGTTCC/TTGCTG 1 -- ng317Minor allele frequency- T:0.07EU EA WA NA 560
rs96051891,2
A,C,F,H15869300(+) CCTCTG/CGTTCA 1 -- ng317Minor allele frequency- C:0.27EU EA WA NA 560
rs39486371,2
A,C,F,H15823263(+) TTGGGT/ACCCCG 1 -- ut317Minor allele frequency- A:0.30EU EA WA NA 558
rs10247301,2
A,C,F15822770(+) CCCTCG/ACTCCC 1 -- ng511Minor allele frequency- A:0.18EA 180
rs72914041,2
C,F,H15869577(+) GATTCG/AGCCCA 1 -- ng3112Minor allele frequency- A:0.10EU EA WA NA 1052
rs119132271,2
C,F,H15869890(+) GCCAGT/CTGGAG 1 -- ng318Minor allele frequency- C:0.11EU EA WA 838
About this table

HapMap Linkage Disequilibrium images for GAB4 (up to first 250kb)

(in which this Gene is Involved, According to OMIM, UniProtKB, PharmGKB, Genatlas, GeneTests, Blood group antigen gene mutations by BGMUT, HGMD, GAD, HuGE Navigator, BCGD, and/or TGDB.)
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Human Genome Epidemiology Navigator: GAB4 (1 document)

(Possibly Related Articles in Doctor's Guide)
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  --

(in PubMed. Associations of this gene to articles via 1Novoseek, 2HGNC, 3Entrez Gene, 4UniProtKB/Swiss-Prot, 5UniProtKB/TrEMBL, 6GAD, and/or 7PharmGKB)
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2 PubMed articles for GAB4 gene:
(in PubMed, OMIM, and NCBI Bookshelf)
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 ANDOR
Aliases
Free Text  

  Query String
PubMed
OMIM
NCBI Bookshelf
  (Note: In FireFox, select the above section and copy using Ctrl-C)
(According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, and/or H-InvDB)
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Entrez Gene: 128954 HGNC: 18325 Ensembl:ENSG00000215568 euGenes: HUgn128954 ECgene: GAB4
H-InvDB: GAB4
(According to HUGE)
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  --
(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
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  --
(Available from WIS Yeda, Salk, Tufts)
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  --
(Reagents available from Applied Biosystems, Antibodies and assays by Cell Signaling Technology, Abcam, Novus Biologicals,
Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich,
Enzo Life Sciences, and/or Tocris Bioscience)
About This Section



Products for GAB4:
 TaqMan ® Gene Expression Assays
 TaqMan ® Genotyping Assays
  Free SNP selection tool



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 Millipore Custom Antibody & Bulk Services
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 Predesigned and custom siRNAs for GAB4 Browse antibodies at Sigma-Aldrich
 Explore super-pooled esiRNAs Browse proteins at Sigma-Aldrich
 Lentivirus-delivered shRNAs for GAB4 Browse small molecules at Sigma-Aldrich
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 Search Novus for antibodies for GAB4

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