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Aliases & Descriptions for G6PC3
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| EC 3.1.3.9 3 | | G6Pase-beta 2, 3 | | SCN4 2, 5 | | UGRP 1, 2, 3, 5 |
| | | Descriptions |
|---|
| G-6-Pase 3 3 | | G6Pase 3 3 | | Glucose-6-phosphatase beta 3 | Ubiquitous glucose-6-phosphatase catalytic subunit-related protein 3 | | glucose 6 phosphatase, catalytic, 3 2 | | glucose-6-phosphatase catalytic subunit 3 2 | ubiquitously expressed G6Pase catalytic subunit-related protein 2 |
|
| | Search outside databases for aliases for G6PC3 genePrevious GC identifer: GC17P042623 |
Summaries for G6PC3(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for G6PC3: Glucose-6-phosphatase (G6Pase) is located in the endoplasmic reticulum (ER) and catalyzes hydrolysis of G6P to glucose and phosphate, the last step of the gluconeogenic and glycogenolytic pathways. G6PC3 is a ubiquitously expressed G6Pase catalytic subunit (Martin et al., 2002 [PubMed 12370122]; Guionie et al., 2003 [PubMed 12965222]).[supplied by OMIM] UniProtKB/Swiss-Prot: G6PC3_HUMAN, Q9BUM1Function: Hydrolyzes glucose-6-phosphate to glucose in the endoplasmic reticulum. May form with the glucose-6-phosphate transporter (SLC37A4/G6PT) a ubiquitously expressed complex responsible for glucose production through glycogenolysis and gluconeogenesis. Probably required for normal neutrophil function |
Genomic Location for G6PC3
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the G6PC3 gene 
Entrez Gene cytogenetic band: 17q21.31 Ensembl cytogenetic band: 17q21.31 HGNC cytogenetic band: 17q21.31G6PC3 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 17 GeneLoc Exon Structure GeneLoc location for GC17P039503:
(about GC identifiers)
Start:
|
39,503,644 bp from pter |
End:
|
39,509,238 bp from pter |
Size:
|
5,595 bases |
Orientation:
|
plus strand |
RefSeq DNA sequence:- NC_000017.9 NT_010783.14
| Proteins for G6PC3
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: G6PC3_HUMAN, Q9BUM1 (See
protein sequence)Recommended Name: Glucose-6-phosphatase 3 Size: 346 amino acids; 38735 Da
Subcellular location: Endoplasmic reticulum membrane; Multi-pass membrane protein
Caution: According to PubMed:12370122 it has no hydrolytic activity
Secondary accessions: Q8WU15REFSEQ proteins: NP_612396.1
ENSEMBL proteins: ENSP00000269097
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
4 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for G6PC3: Assays for G6PC3: | Protein
Domains/ Families for G6PC3(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry Q9BUM1
ProtoNet protein and cluster: Q9BUM1 1 Blocks protein family: IPB000326 PA-phosphatase related phosphoesterase
UniProtKB/Swiss-Prot: G6PC3_HUMAN, Q9BUM1Similarity: Belongs to the glucose-6-phosphatase family | Gene Function for G6PC3
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_138387
Applied Biosystems Silencer® siRNAs for G6PC3
Sigma-Aldrich siRNA and siRNA Panels for G6PC3  Sigma-Aldrich shRNA for G6PC3  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_138387                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_138387                                  untagged cDNA clones in CMV expression vector (see all 3): AK091417 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_138387
UniProtKB/Swiss-Prot: G6PC3_HUMAN, Q9BUM1Function: Hydrolyzes glucose-6-phosphate to glucose in the endoplasmic reticulum. May form with the glucose-6-phosphate transporter (SLC37A4/G6PT) a ubiquitously expressed complex responsible for glucose production through glycogenolysis and gluconeogenesis. Probably required for normal neutrophil functionCatalytic activity: D-glucose 6-phosphate + H(2)O = D-glucose + phosphateEnzyme regulation: Inhibited by vanadateBiophysicochemical properties: Kinetic parameters: KM=1.0 mM for glucose-6-phosphate (at pH 5.5.); KM=2.0 mM for glucose-6-phosphate (at pH 6.5.); Note=8 times less active compared to G6PC under the same experimental conditions;Enzyme Number (IUBMB): EC 3.1.3.9 7 MGI mutant phenotypes (inferred from 3 alleles ) (MGI details for G6pc3):
2 Gene Ontology (GO) molecular function terms (links to tree view): | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0004346 | glucose-6-phosphatase activity |
IEA | -- | | GO:0016787 | hydrolase activity |
IEA | -- | About this table | Pathways & Interactions for G6PC3
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
| 5 Sigma-Aldrich "Your Favorite Gene" Pathways for G6PC3 (Your Favorite Gene powered by Ingenuity) 
UniProtKB/Swiss-Prot: G6PC3_HUMAN, Q9BUM1Pathway: Carbohydrate biosynthesis; gluconeogenesis 3 Interacting proteins for G6PC3 (ENSP000002690973) via UniProtKB, MINT, and/or STRINGAbout this table
2 Gene Ontology (GO) biological process terms (links to tree view): | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0006094 | gluconeogenesis |
IEA | -- | | GO:0015760 | glucose-6-phosphate transport |
IEA | -- | About this table
|
Drugs & Compounds for G6PC3(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for G6PC3
|
Transcripts for G6PC3(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_138387
Sigma-Aldrich siRNA and siRNA Panels for G6PC3  Sigma-Aldrich shRNA for G6PC3  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_138387 REFSEQ mRNAs for G6PC3 gene: NM_138387.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_138387               OriGene GFP tagged cDNA clone in CMV expression vector: NM_138387                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_138387                                  untagged cDNA clones in CMV expression vector (see all 3): AK091417  Additional cDNA sequence: AK091417.1 BC002494.2 BC021574.1 BC062596.1 CR590248.1 CR590923.1 CR591259.1 CR595523.1 CR597546.1 CR598130.1 CR598996.1 CR601615.1 CR605360.1 CR607017.1 CR607320.1 CR608514.1 CR608544.1 CR609384.1 CR613351.1 CR615676.1 CR617855.1 CR619652.1 CR622205.1 CR623861.1 CR624359.1 CR625794.1 15 DOTS entries: DT.214766 DT.100817498 DT.100817495 DT.95245069 DT.100817504 DT.100817486 DT.100817488 DT.100817499 DT.120906481 DT.99939549 DT.100817490 DT.92046312 DT.92452291 DT.95245003 DT.99926739 24/365 AceView cDNA sequences (see all 365
):BQ919298 CR607017 CA454913 BF344330 AI670976 BC002494 AL526455 BQ946868 BG419790 BU151257 CR591259 CA488619 AI283242 BM042047 CA454159 AI274000 BM851686 CR607320 CR608514 BE397771 AI540614 CR613351 CR601615 BU557413
highest scoring ESTs for G6PC3:AI669655 AA232553 AA292746 AA293719 AA296469 AA318820 AA364430 AA427485 AA477724 AA477725 Unigene Cluster for G6PC3: Glucose 6 phosphatase, catalytic, 3 Hs.294005 [show with all ESTs]Unigene Representative Sequence: AK091417
GeneLoc Exon Structure
5/9 Alternative Splicing Database (ASD) splice patterns (SP) for G6PC3 (see all 9
)
| ExUns: | 1a | · | 1b | · | 1c | · | 1d | ^ | 2a | · | 2b | ^ | 3 | ^ | 4 | ^ | 5 | ^ | 6a | · | 6b | · | 6c | ^ | 7a | · | 7b | · | 7c | · | 7d | · | 7e | |
| SP1: | |   | |   | |   | - |   | |   | |   | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |   | |
| SP2: | |   | |   | |   | - |   | - |   | - |   | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |   | |
| SP3: | |   | |   | |   | |   | - |   | - |   | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |   | |
| SP4: | |   | |   | |   | - |   | - |   | - |   | |   | |   | - |   | - |   | |   | |   | |   | |   | |   | |   | |   | |
| SP5: | |   | |   | |   | - |   | - |   | - |   | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |   |
About this scheme
ECgene alternative splicing isoforms for G6PC3
1 Ensembl transcript including schematic representation: ENST00000269097
|
Expression for G6PC3
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| G6PC3 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for G6PC3
1 / 2 / 3 5 probe-sets matching G6PC3 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: TTCAGTGCCC
SOURCE GeneReport for Unigene cluster: Hs.294005 UniProtKB/Swiss-Prot: G6PC3_HUMAN, Q9BUM1Tissue specificity: Ubiquitously expressed. Highly expressed in skeletal muscle, at intermediate levels in heart, brain, placenta, kidney, colon, thymus, spleen and pancreas. Also detected in testis, prostate, ovary, liver, lung, small intestine and peripheral blood lymphocytes |
Orthologs for G6PC3
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for G6PC3 gene from 5/9 species (see all 9
)
| Organism |
Gene |
Locus |
Description |
Human Similarity |
NCBI accessions |
dog (Canis familiaris) |
G6PC31 |
-- |
glucose 6 phosphatase, catalytic, 3 |
90.37(n) 91.33(a) |
490942 XM_548065.2 XP_548065.2 |
cow (Bos taurus) |
G6PC31 |
-- |
glucose 6 phosphatase, catalytic, 3 |
91.43(n) 91.91(a) |
369023 NM_183364.2 NP_899208.2 |
rat (Rattus norvegicus) |
G6pc31 |
-- |
glucose 6 phosphatase, catalytic, 3 |
84.59(n) 81.79(a) |
303565 NM_176077.3 NP_788266.2 |
mouse (Mus musculus) |
G6pc31, 5 |
115
|
glucose 6 phosphatase, catalytic, 31, 5 |
85.45(n)1 84.1(a)1 |
684011 NM_175935.31 NP_787949.21 AK0029665 AK1653955 (see all 16) |
zebrafish (Danio rerio) |
zgc:1584251 |
-- |
zgc:158425 |
53.25(n) 46.85(a) |
790919 NM_001080066.1 NP_001073535.1 |
About this table Species with no ortholog for G6PC3
ENSEMBL Gene Tree for G6PC3 | Paralogs for G6PC3(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for G6PC3 gene
- G6PC22 G6PC2
|
SNPs/Variants for G6PC3(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for G6PC3 (up to first 250kb)
|
Disorders & Mutations for G6PC3
(in which this Gene is Involved, According to
OMIM, UniProtKB,
PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 611045 disorders: 612541 UniProtKB/Swiss-Prot: G6PC3_HUMAN, Q9BUM1
Defects in G6PC3 are the cause of autosomal recessive severe congenital neutropenia type 4 (SCN4) [MIM:612541]. Autosomal recessive SCN constitutes a primary immunodeficiency syndrome associated with increased apoptosis in myeloid cells. Individuals show a paucity of mature neutrophils in peripheral blood and bone marrow and develop life-threatening bacterial infections. SCN4 is a severe congenital neutropenia syndrome associated with cardiac and urogenital malformationsHuman Gene Mutation Database: G6PC3
|
Medical News for G6PC3(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for G6PC3 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/11 PubMed articles for G6PC3 gene (see all 11
):- Identification and characterization of a human cDNA and gene encoding a ubiquitously expressed glucose-6-phosphatase catalytic subunit-related protein. (PubMed id 12370122)1, 2, 3, 4 Martin C.C....O'Brien R.M. (2002)
- Identification and characterisation of a new human glucose-6-phosphatase isoform. (PubMed id 12965222)2, 3, 4 Guionie O....Burchell A. (2003)
- A syndrome with congenital neutropenia and mutations in G6PC3. (PubMed id 19118303)3, 4 Boztug K.... Klein C. (2009)
- Histidine 167 is the phosphate acceptor in glucose-6-phosphatase-beta forming a phosphohistidine enzyme intermediate during catalysis. (PubMed id 14718531)4 Ghosh A.... Chou J.Y. (2004)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)4 Gerhard D.S....Malek J. (2004)
- Identification and characterization of a cDNA and the gene encoding the mouse ubiquitously expressed glucose-6-phosphatase catalytic subunit-related protein. (PubMed id 14765991)4 Boustead J.N.... O'Brien R.M. (2004)
- A glucose-6-phosphate hydrolase, widely expressed outside the liver, can explain age-dependent resolution of hypoglycemia in glycogen storage disease type Ia. (PubMed id 13129915)4 Shieh J.J....Chou J.Y. (2003)
- Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932)3 Strausberg R.L....Marra M.A. (2002)
- Hepatitis C virus core protein interacts with 14-3-3 protein and activates the kinase Raf-1. (PubMed id )4 Aoki H.... Hino O. (2000)
- Deletion of the gene encoding the ubiquitously expressed glucose-6-phosphatase catalytic subunit-related protein (UGRP)/glucose-6-phosphatase catalytic subunit-beta results in lowered plasma cholesterol and elevated glucagon. (PubMed id 17023421)1 Wang Y....O'Brien R.M. (2006)
|
Search for G6PC3
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing G6PC3
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing G6PC3
(According to HUGE)
About This Section
| -- |
Specialized Databases showing G6PC3(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for G6PC3(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for G6PC3:

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